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SCNpilot_cont_300_bf_scaffold_3319

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3319_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1542
DNA (1542bp) protein (514aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN70_SORCE rbh
Flagellar regulatory protein FleQ {ECO:0000313|EMBL:EYF00383.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source
acetoacetate metabolism regulatory protein AtoC
SCNpilot_cont_300_bf_scaffold_3319_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1613..2752
DNA (1140bp) protein (380aa)
Probable serine protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EWG2_SORC5 rbh
serine protease
Probable serine protease {ECO:0000313|EMBL:CAN94317.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_3319_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2985..5537
DNA (2553bp) protein (851aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GU27_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97027.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_3319_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5558..6541
DNA (984bp) protein (328aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y964_SORCE rbh
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGP42027.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangiu
SCNpilot_cont_300_bf_scaffold_3319_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6538..8085
DNA (1548bp) protein (516aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMT4_SORC5 rbh
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAN93482.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" so
SCNpilot_cont_300_bf_scaffold_3319_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8082..9041
DNA (960bp) protein (320aa)
Transport system permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMT7_SORC5 rbh
ABC transporter permease
Transport system permease protein {ECO:0000313|EMBL:CAN93483.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="So
SCNpilot_cont_300_bf_scaffold_3319_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9107..10708
DNA (1602bp) protein (534aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cys
Putative sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAG8_MYXFH
putative sensory box histidine kinase/response regulator
SCNpilot_cont_300_bf_scaffold_3319_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10760..11485
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YGK0_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41998.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_3319_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11574..12449)
DNA (876bp) protein (292aa)
folD1; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=FOLD_SORC5 rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Ch
SCNpilot_cont_300_bf_scaffold_3319_10

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comp(12618..12980)
DNA (363bp) protein (121aa)
Chromosome partitioning protein ParB n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIR3_SORC5
Marine sediment metagenome DNA, contig: S06H3_L00262 {ECO:0000313|EMBL:GAI06487.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
parB; chromosome partitioning protein ParB
SCNpilot_cont_300_bf_scaffold_3319_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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13036..13590
DNA (555bp) protein (185aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
SCNpilot_cont_300_bf_scaffold_3319_12

Not on your lists

comp(13470..13871)
DNA (402bp) protein (134aa)
Chromosome partitioning protein ParA n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP26_SORCE
Marine sediment metagenome DNA, contig: S06H3_L00262 {ECO:0000313|EMBL:GAI06483.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
chromosome partitioning protein ParA
Displaying 12 items

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