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SCNpilot_cont_300_bf_scaffold_1954

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1954_1
unknown

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887..1210
DNA (324bp) protein (108aa)
transposase
SCNpilot_cont_300_bf_scaffold_1954_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1210..1590
DNA (381bp) protein (127aa)
IS66 Orf2 family protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7P6_ANAD2
IS66 Orf2 family protein
IS66 Orf2 family protein {ECO:0000313|EMBL:ACL63388.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
SCNpilot_cont_300_bf_scaffold_1954_3
unknown

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1929..2903
DNA (975bp) protein (325aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1954_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3048..3584
DNA (537bp) protein (179aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
SCNpilot_cont_300_bf_scaffold_1954_5
unknown

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3581..4546
DNA (966bp) protein (322aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1954_6
unknown

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4608..5714
DNA (1107bp) protein (369aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1954_7

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5843..6118
DNA (276bp) protein (92aa)
IS66 Orf2 family protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B7Y3_9RHOB
Marine sediment metagenome DNA, contig: S03H2_S09387 {ECO:0000313|EMBL:GAH70985.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
IS66 Orf2 family protein
SCNpilot_cont_300_bf_scaffold_1954_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6190..6567)
DNA (378bp) protein (126aa)
protein, may interact with ubiquitin n=1 Tax=Rhizobium meliloti RepID=UPI00037298D1
Uncharacterized protein {ECO:0000313|EMBL:AKF85265.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1954_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6690..7466
DNA (777bp) protein (259aa)
dehydrogenase/reductase oxidoreductase (EC:1.-.-.-)
Probable dehydrogenase/reductase oxidoreductase protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FAS1_SORC5
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AKF80326.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
SCNpilot_cont_300_bf_scaffold_1954_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7576..9411)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFN4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41447.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
SCNpilot_cont_300_bf_scaffold_1954_11
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9522..9869
DNA (348bp) protein (116aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AFZ14231.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AFZ14231.1};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinaliu
dTDP-glucose 4,6-dehydratase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W1Z4_9CYAN
SCNpilot_cont_300_bf_scaffold_1954_12
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9866..10495
DNA (630bp) protein (210aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AFZ14231.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AFZ14231.1};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinaliu
dTDP-glucose 4,6-dehydratase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W1Z4_9CYAN
SCNpilot_cont_300_bf_scaffold_1954_13
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10492..11724
DNA (1233bp) protein (411aa)
C-methyltransferase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W454_9CYAN rbh
C-methyltransferase
C-methyltransferase {ECO:0000313|EMBL:AFZ14230.1}; Flags: Precursor;; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum
SCNpilot_cont_300_bf_scaffold_1954_14
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11721..12230
DNA (510bp) protein (170aa)
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme id=2115596 bin=GWB2_Geobacter-like_52_12 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
SCNpilot_cont_300_bf_scaffold_1954_15
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12337..12450
DNA (114bp) protein (38aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCI36688.1}; TaxID=721123 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9701.;"
Displaying 15 items

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