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SCNpilot_cont_300_bf_scaffold_2554

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2554_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1425
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XML0_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34417.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2554_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1619..1942
DNA (324bp) protein (108aa)
Fis family sigma-54 specific transcriptional regulator id=12556884 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Formate hydrogenlyase transcriptional activator {ECO:0000313|EMBL:AKF05649.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandara
sigma-54 factor interaction domain-containing protein
SCNpilot_cont_300_bf_scaffold_2554_3
unknown

Not on your lists

2045..2809
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2554_4
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2820..3749)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI32_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM74460.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
SCNpilot_cont_300_bf_scaffold_2554_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..6436)
DNA (2688bp) protein (896aa)
TonB family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHF4_CORCM
TonB family protein / TonB-dependent receptor {ECO:0000313|EMBL:AKF05638.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaraci
TonB family protein
SCNpilot_cont_300_bf_scaffold_2554_6
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6448..7359)
DNA (912bp) protein (304aa)
lipoprotein Tax=RBG_16_Actinobacteria_67_15_curated
SCNpilot_cont_300_bf_scaffold_2554_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7359..8792)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI36_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF02619.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
phosphate-selective porin o and p family protein
SCNpilot_cont_300_bf_scaffold_2554_8
unknown

Not on your lists

comp(8832..9158)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2554_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9161..10423)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI38_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF02621.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2554_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10664..12778
DNA (2115bp) protein (705aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
katE; catalase HPII (EC:1.11.1.6)
Catalase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TQ6_STIAD rbh
SCNpilot_cont_300_bf_scaffold_2554_11
unknown

Not on your lists

12847..13023
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2554_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13306..14097
DNA (792bp) protein (264aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000255|HAMAP-Rule:MF_00218}; Short=UPD {ECO:0000255|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000255|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000255|HAMAP-Rule:MF_0
Uroporphyrinogen decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=DCUP_SORC5 rbh
SCNpilot_cont_300_bf_scaffold_2554_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14097..15095
DNA (999bp) protein (333aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP09_SORCE
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2554_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15092..16450
DNA (1359bp) protein (453aa)
Protoporphyrinogen IX oxidase, aerobic, HemY {ECO:0000313|EMBL:EYF02341.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyce
Protoporphyrinogen IX and coproporphyrinogen III oxidase id=2521457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
protoporphyrinogen oxidase
SCNpilot_cont_300_bf_scaffold_2554_15
unknown

Not on your lists

comp(16492..16911)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2554_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16915..17100)
DNA (186bp) protein (62aa)
Methylmalonyl-CoA mutase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7E2_SORCE
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AGP40789.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
SCNpilot_cont_300_bf_scaffold_2554_17
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17533..19032)
DNA (1500bp) protein (500aa)
Uncharacterized protein (Fragment) n=1 Tax=Mycobacterium tuberculosis T85 RepID=D5Y3E8_MYCTU
Uncharacterised protein {ECO:0000313|EMBL:CRD64008.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="M
SCNpilot_cont_300_bf_scaffold_2554_18

Not on your lists

comp(19159..19824)
DNA (666bp) protein (222aa)
DedA protein n=1 Tax=uncultured bacterium A1Q1_fos_962 RepID=L7VST4_9BACT
DedA protein {ECO:0000313|EMBL:AGC72172.1}; TaxID=1256592 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_962.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2554_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20112..20765)
DNA (654bp) protein (218aa)
pp2c11; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GGK4_SORC5
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:EYF01828.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiinea
Displaying 19 items

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