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SCNpilot_cont_300_bf_scaffold_2609

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2609_1
unknown

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2609_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247..909)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YDG5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42406.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(906..1910)
DNA (1005bp) protein (335aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301};; TaxID=12
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMD4_SORCE
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2609_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2062..2703
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWS6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08411.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2609_5
unknown

Not on your lists

comp(2873..3616)
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2609_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3729..5285)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPC6_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35027.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5450..6892)
DNA (1443bp) protein (481aa)
gatB; glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN39_SORCE rbh
SCNpilot_cont_300_bf_scaffold_2609_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7003..7293
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2S1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37188.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_9
unknown

Not on your lists

7479..7790
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2609_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7772..8995
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EPZ0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94071.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_2609_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9023..9607)
DNA (585bp) protein (195aa)
Universal stress protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYM8_SORC5
universal stress protein
Universal stress protein {ECO:0000313|EMBL:CAN97558.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_12
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9797..10141
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GH81_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIG18891.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
SCNpilot_cont_300_bf_scaffold_2609_13
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10151..11431)
DNA (1281bp) protein (427aa)
Glycogen phosphorylase (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechoc
Glycogen phosphorylase n=7 Tax=Bacteria RepID=PHSG_SYNY3
SCNpilot_cont_300_bf_scaffold_2609_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

11526..13184
DNA (1659bp) protein (553aa)
hypothetical protein id=2306561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uncharacterized protein {ECO:0000313|EMBL:CCZ45673.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
SCNpilot_cont_300_bf_scaffold_2609_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13006..13998)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y107_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF01600.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2609_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14130..15044)
DNA (915bp) protein (305aa)
prsA1; ribose-phosphate diphosphokinase (EC:2.7.6.1)
Putative Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:CAN96709.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CAN96709.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; S
Putative Ribose-phosphate diphosphokinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GP59_SORC5 rbh
SCNpilot_cont_300_bf_scaffold_2609_17
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15091..16440
DNA (1350bp) protein (450aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ACY16189.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACY16189.1};; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Na
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LY39_HALO1 rbh
SCNpilot_cont_300_bf_scaffold_2609_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

16482..16718
DNA (237bp) protein (79aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AEP11318.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEP11318.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" s
Methylmalonyl-CoA mutase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE98_CHLTF
SCNpilot_cont_300_bf_scaffold_2609_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16724..17476
DNA (753bp) protein (251aa)
yqcB; pseudouridylate synthase/tRNA pseudouridine synthase C (EC:4.2.1.70)
Pseudouridylate synthase/tRNA pseudouridine synthase C {ECO:0000313|EMBL:CAN93015.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CAN93015.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; M
Pseudouridine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEI0_SORC5
SCNpilot_cont_300_bf_scaffold_2609_20
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17473..18153
DNA (681bp) protein (227aa)
DTW domain containing protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUX4_HALO1
DTW domain-containing protein
DTW domain containing protein {ECO:0000313|EMBL:ACY14014.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Hali
SCNpilot_cont_300_bf_scaffold_2609_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18264..18887
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3J1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95768.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_2609_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18928..19119
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0K7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39007.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19367..19642
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3J1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95768.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_2609_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19647..20195
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXN9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37264.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_2609_25
unknown

Not on your lists

20285..20911
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2609_26
unknown

Not on your lists

20854..21597
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2609_27
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21675..21869)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UR84_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49099.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
Displaying 27 items

View Taxonomy