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SCNpilot_cont_300_bf_scaffold_5028

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5028_1
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..576
DNA (576bp) protein (192aa)
calB; coniferyl aldehyde dehydrogenase (EC:1.2.1.68); K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] Tax=CG_Delta_07
Aldehyde dehydrogenase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NV54_CHRVO
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_5028_2
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(635..2011)
DNA (1377bp) protein (459aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7G5_ANADF
integral membrane sensor signal transduction histidine kinase Tax=RBG_16_Deltaproteobacteria_71_12_curated
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_5028_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2172..2732)
DNA (561bp) protein (187aa)
Hypothetical 19.5 kD protein in emrE-rus intergenic region n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FKB2_SORC5
hypothetical protein
Hypothetical 19.5 kD protein in emrE-rus intergenic region {ECO:0000313|EMBL:CAN95100.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
SCNpilot_cont_300_bf_scaffold_5028_4
unknown

Not on your lists

comp(2902..3954)
DNA (1053bp) protein (351aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_5
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4142..4354
DNA (213bp) protein (71aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LBZ4_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM55079.1}; TaxID=1204343 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis BEST7613.;"
SCNpilot_cont_300_bf_scaffold_5028_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..4485
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNK6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93592.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_5028_7
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4568..4972)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YYN1_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD56710.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_300_bf_scaffold_5028_8
unknown

Not on your lists

comp(5151..5444)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..6500)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM77_SORCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF04905.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5028_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6795..7442)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF00473.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
SCNpilot_cont_300_bf_scaffold_5028_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9302..9943
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F379_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94557.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_5028_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9888..10496)
DNA (609bp) protein (203aa)
Phospholipase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWP2_SORCE
phospholipase
Phospholipase {ECO:0000313|EMBL:AGP34983.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
SCNpilot_cont_300_bf_scaffold_5028_13
unknown

Not on your lists

10673..11023
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_14
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11216..11803
DNA (588bp) protein (196aa)
Glutathione peroxidase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I2M7_9GAMM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarbon
putative glutathione peroxidase
SCNpilot_cont_300_bf_scaffold_5028_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11975..12940
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV80_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37132.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_5028_16
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12960..13376
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HJ14_9BACL
Putative uncharacterized protein {ECO:0000313|EMBL:EHB62732.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5028_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13398..14393)
DNA (996bp) protein (332aa)
dihydrouridine synthase TIM-barrel protein nifR3 (EC:1.-.-.-)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CAN93898.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacte
tRNA-dihydrouridine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GW95_SORC5 rbh
SCNpilot_cont_300_bf_scaffold_5028_18
unknown

Not on your lists

comp(14694..15161)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_19
Drosophila willistoni, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

15271..16053
DNA (783bp) protein (261aa)
GK23126 n=1 Tax=Drosophila willistoni RepID=B4NME2_DROWI
GK23126 {ECO:0000313|EMBL:EDW85531.1}; TaxID=7260 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroid
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5028_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16086..17000)
DNA (915bp) protein (305aa)
ROK family protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S6W9_PROA2
Uncharacterized protein {ECO:0000313|EMBL:EYF03007.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
ROK family protein
SCNpilot_cont_300_bf_scaffold_5028_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17021..17998)
DNA (978bp) protein (326aa)
Peptide chain release factor 2 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDS6_SORC5 rbh
prfB1; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452, ECO:0000313|EMBL:CAN91791.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiac
SCNpilot_cont_300_bf_scaffold_5028_22
unknown

Not on your lists

comp(18203..19015)
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19134..20444)
DNA (1311bp) protein (437aa)
Glycine receptor, alpha 4 subunit n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG5_9PROT rbh
Glycine receptor, alpha 4 subunit {ECO:0000313|EMBL:CAM74622.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Ma
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5028_24
unknown

Not on your lists

comp(20441..20827)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5028_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20945..21484)
DNA (540bp) protein (180aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG4_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CAM74621.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="
methyl-accepting chemotaxis protein
Displaying 25 items

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