ggKbase home page

SCNpilot_cont_300_bf_scaffold_5117

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5117_1
unknown

Not on your lists

3..287
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5117_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319..1236)
DNA (918bp) protein (306aa)
Diguanylate cyclase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIH8_SORCE rbh
FHA domain/GGDEF domain protein {ECO:0000313|EMBL:AKF06678.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_5117_3

Not on your lists

comp(1470..2588)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YDI4_SORCE rbh
Marine sediment metagenome DNA, contig: S01H1_L07692 {ECO:0000313|EMBL:GAF75780.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5117_4
uncultured delta proteobacterium, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2861..3055
DNA (195bp) protein (65aa)
Hypothetical conserved protein n=1 Tax=uncultured delta proteobacterium RepID=H5SLM8_9DELT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL57064.1}; TaxID=34034 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium.;"
SCNpilot_cont_300_bf_scaffold_5117_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..3720
DNA (669bp) protein (223aa)
Putative DNA transport competence protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5F2_SORC5
DNA transport competence protein
Putative DNA transport competence protein {ECO:0000313|EMBL:CAN97799.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" so
SCNpilot_cont_300_bf_scaffold_5117_6
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3739..4050)
DNA (312bp) protein (104aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W9F0_9EURY
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ELY44953.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorub
ribosomal-protein-alanine acetyltransferase
SCNpilot_cont_300_bf_scaffold_5117_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5131)
DNA (717bp) protein (239aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCZ3_SORCE
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
SCNpilot_cont_300_bf_scaffold_5117_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5128..6132)
DNA (1005bp) protein (335aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00111}; EC=2.5.1.7 {ECO:0000255|HAMAP-Rule:MF_00111};; Enoylpyruvate transferase {ECO:0000255|HAMAP-Rule:MF_00111}; UDP-N-a
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=MURA_SORC5 rbh
Displaying 8 items

View Taxonomy