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SCNpilot_cont_300_bf_scaffold_5473

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5473_1
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

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comp(35..1285)
DNA (1251bp) protein (417aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2I9_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ50103.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5473_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1321..2208)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5E7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF04631.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
SCNpilot_cont_300_bf_scaffold_5473_3
unknown

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comp(2205..2309)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_4
unknown

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2525..2725
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_5
unknown

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comp(2774..3835)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4181..6499
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4T1_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37923.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_5473_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7307..8083
DNA (777bp) protein (259aa)
Triple helix repeat-containing collagen n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBB5_MYXFH rbh
triple helix repeat-containing collagen
Triple helix repeat-containing collagen {ECO:0000313|EMBL:AEI63322.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
SCNpilot_cont_300_bf_scaffold_5473_8
unknown

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comp(8254..8862)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_9
unknown

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comp(8904..9986)
DNA (1083bp) protein (361aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_10
unknown

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10175..10636
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10865..12019)
DNA (1155bp) protein (385aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG4_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CAM74621.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="
methyl-accepting chemotaxis sensory transducer
SCNpilot_cont_300_bf_scaffold_5473_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12174..13196)
DNA (1023bp) protein (341aa)
Cation diffusionfacilitator family transporter n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZL2_CORCM rbh
Cation transport protein {ECO:0000313|EMBL:KFE62521.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hya
catA; cation diffusionfacilitator family transporter
SCNpilot_cont_300_bf_scaffold_5473_13
unknown

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13673..14116
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14413..15843
DNA (1431bp) protein (477aa)
betC; choline sulfatase (EC:3.1.6.6)
Choline sulfatase {ECO:0000313|EMBL:CAN94089.1}; EC=3.1.6.6 {ECO:0000313|EMBL:CAN94089.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiace
Choline sulfatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ37_SORC5 rbh
SCNpilot_cont_300_bf_scaffold_5473_15
unknown

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15956..17083
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17025..19097
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GFG7_SORC5
Helicase, SNF2/RAD54 family {ECO:0000313|EMBL:AKF05973.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="San
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5473_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19221..20204)
DNA (984bp) protein (328aa)
Fatty acid desaturase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWD2_STIAD rbh
Fatty acid desaturase {ECO:0000313|EMBL:KFA90921.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cyst
fatty acid desaturase family protein
SCNpilot_cont_300_bf_scaffold_5473_18
unknown

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comp(20265..21356)
DNA (1092bp) protein (364aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5473_19
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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21425..22984
DNA (1560bp) protein (520aa)
Oxidoreductase, short chain dehydrogenase/reductase family id=3462440 bin=GWA1_Deltaproteobacteria_52_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
short chain dehydrogenase Tax=GWA1_Bdellovibrionales_52_35_curated
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_5473_20
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22978..23859
DNA (882bp) protein (294aa)
Phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H441_CAUCN rbh
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AAK25185.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_5473_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24015..25007
DNA (993bp) protein (331aa)
Peptidase S9 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHT2_SORCE
peptidase S9
Peptidase S9 {ECO:0000313|EMBL:AGP32124.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum S
Displaying 21 items

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