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SCNpilot_cont_300_bf_scaffold_19400_2

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(693..1352)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHM1_METFJ similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 237.0
  • Bit_score: 108
  • Evalue 7.30e-21
RNA polymerase sigma factor for flagellar operon {ECO:0000313|EMBL:EYF05758.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondro similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 202.0
  • Bit_score: 113
  • Evalue 3.20e-22
RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 237.0
  • Bit_score: 108
  • Evalue 2.10e-21

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGAAACGCAGCCAGCCTCGTTCTCGGTCTCGAACAGCGACTTCGCCTCTCACATGCATCTCGTCCTCGGCATCGTTGCCGACTTCATGCGGCGGGTTCCGCGCAGCGTTCAGCGCGAGGACCTCGTGGCCGCAGGTTCCATGGGCCTGCTCCAGGCGCTCCGCTCGCAGAAGCACACGTGCCCGGAGATGCTCACCGCGTATGCGCGGATCCGCATCCGCGGCGCCGTCATCGACGAGCTCCGCCGTCACGACTGGTCCCCCCGGCGCCGGCGGACGTCCGGTCCGAGCGCCGTGACCAAGAGCCCGTCGCTCGTGCCGGCACCGGGCATGCCGGCGGCTGAAGAGAAGAGCGGCGTCGTCGTGATCGGCTTCGACGACCTGCCGCCGACGCACTCGCTCCGTGAGGAGGGGCCGTCGCCGCTCGAGCAGGTCGAGTTCCGGCGCTCGAGTGTGGAGGTGCGCCGCGCCGTCGACATGCTCCCGCCGCGTGAGCGCACCATCGTTCGCATGCGCTTCTTCGACGACGTGTCGAGCAAGGCCATTGCGTCGACGCTTGGATTGAGTGAAGCTCGAGTGTCGCAATTGCTGGCACGCGCGACAACGCAGCTCAAGCAGCTCCTCGCCGAGCAGCCGGATGAGTTGACTCTCGCTGCGTAG
PROTEIN sequence
Length: 220
METQPASFSVSNSDFASHMHLVLGIVADFMRRVPRSVQREDLVAAGSMGLLQALRSQKHTCPEMLTAYARIRIRGAVIDELRRHDWSPRRRRTSGPSAVTKSPSLVPAPGMPAAEEKSGVVVIGFDDLPPTHSLREEGPSPLEQVEFRRSSVEVRRAVDMLPPRERTIVRMRFFDDVSSKAIASTLGLSEARVSQLLARATTQLKQLLAEQPDELTLAA*