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SCNpilot_cont_300_bf_scaffold_19400

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_19400_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..675)
DNA (675bp) protein (225aa)
two component sigma-54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4356251 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-binding response regulator
SCNpilot_cont_300_bf_scaffold_19400_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(693..1352)
DNA (660bp) protein (220aa)
RNA polymerase sigma factor FliA n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHM1_METFJ
RNA polymerase sigma factor for flagellar operon {ECO:0000313|EMBL:EYF05758.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondro
RNA polymerase sigma factor for flagellar operon
SCNpilot_cont_300_bf_scaffold_19400_3
unknown

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comp(1529..1930)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_19400_4
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2325..3152
DNA (828bp) protein (276aa)
EAL domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF69_9DELT
diguanylate phosphodiesterase Tax=RBG_13_Deltaproteobacteria_65_10_curated
diguanylate phosphodiesterase
SCNpilot_cont_300_bf_scaffold_19400_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3260..3682)
DNA (423bp) protein (141aa)
Response regulator receiver protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBI1_MYXFH
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEI63388.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" sou
SCNpilot_cont_300_bf_scaffold_19400_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3781..4479
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW37_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36556.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_19400_7
uncultured myxobacterium HF0200_05J13, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4492..5094
DNA (603bp) protein (201aa)
FOG: CheY-like receiver n=1 Tax=uncultured myxobacterium HF0200_05J13 RepID=E7C3L8_9DELT
FOG: CheY-like receiver {ECO:0000313|EMBL:ADI22042.1}; TaxID=723557 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; environmental samples.;" source="uncultured myxobacterium HF02
DNA-binding response regulator
SCNpilot_cont_300_bf_scaffold_19400_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4941..5840)
DNA (900bp) protein (300aa)
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_300_bf_scaffold_19400_9
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6198..6839
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XL47_SORCE
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_19400_10
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6939..7535
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNF0_SORCE
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
Displaying 10 items

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