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SCNPILOT_CONT_300_BF_Rotifera_32_5_partial

SCNPILOT_CONT_300_BF_unknown_33_5
In projects: SCNPILOT_CONT_300_BF

Consensus taxonomy:

Taxonomy override: Eukaryote

Description

from TS-ESOM (extremely well defined)

Displaying items 101-150 of 803 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_9388 11 5303 bp 35.81 4.31 50.52
SCNpilot_cont_300_bf_scaffold_2699 11 7516 bp 32.76 3.87 45.50
SCNpilot_cont_300_bf_scaffold_4765 11 6688 bp 32.75 3.38 51.90
SCNpilot_cont_300_bf_scaffold_9423 11 6280 bp 30.16 3.72 48.82
SCNpilot_cont_300_bf_scaffold_11762 11 8611 bp 32.60 4.17 42.75
SCNpilot_cont_300_bf_scaffold_2742 11 9396 bp 31.38 4.03 85.98
SCNpilot_cont_300_bf_scaffold_3343 10 8059 bp 33.54 3.96 34.32
SCNpilot_cont_300_bf_scaffold_7629 10 7184 bp 33.46 3.56 45.31
SCNpilot_cont_300_bf_scaffold_3095 10 8179 bp 32.08 4.63 64.37
SCNpilot_cont_300_bf_scaffold_17359 10 6672 bp 31.44 3.84 80.67
SCNpilot_cont_300_bf_scaffold_4047
Domain: Metazoa (50%)
10 7271 bp 31.83 4.56 35.36
SCNpilot_cont_300_bf_scaffold_3114 10 8289 bp 36.57 3.48 52.37
SCNpilot_cont_300_bf_scaffold_12660 10 5741 bp 28.44 3.41 77.39
SCNpilot_cont_300_bf_scaffold_8081 10 10062 bp 33.97 4.09 37.00
SCNpilot_cont_300_bf_scaffold_5303 10 7358 bp 34.28 3.51 28.46
SCNpilot_cont_300_bf_scaffold_11297 10 5739 bp 29.36 4.20 51.49
SCNpilot_cont_300_bf_scaffold_12939
Domain: Metazoa (60%)
10 5085 bp 34.73 3.75 59.94
SCNpilot_cont_300_bf_scaffold_8119
Domain: Metazoa (60%)
10 5024 bp 35.15 3.40 64.73
SCNpilot_cont_300_bf_scaffold_6980
Domain: Metazoa (50%)
10 7105 bp 31.02 4.10 41.93
SCNpilot_cont_300_bf_scaffold_3423 10 6318 bp 32.68 3.97 64.58
SCNpilot_cont_300_bf_scaffold_2567 10 7862 bp 30.72 3.70 50.45
SCNpilot_cont_300_bf_scaffold_15871
Domain: Metazoa (50%)
10 5150 bp 33.36 3.85 57.38
SCNpilot_cont_300_bf_scaffold_6477 10 5652 bp 33.72 3.77 60.46
SCNpilot_cont_300_bf_scaffold_5353
Domain: Metazoa (60%)
10 6677 bp 33.50 4.14 41.61
SCNpilot_cont_300_bf_scaffold_3695
Domain: Metazoa (70%)
10 9007 bp 33.32 3.90 54.19
SCNpilot_cont_300_bf_scaffold_7978 10 6360 bp 34.17 3.63 49.72
SCNpilot_cont_300_bf_scaffold_3959 10 5704 bp 32.40 5.85 66.80
SCNpilot_cont_300_bf_scaffold_11116 10 5940 bp 34.11 5.11 54.85
SCNpilot_cont_300_bf_scaffold_2862 10 7978 bp 31.64 3.71 61.97
SCNpilot_cont_300_bf_scaffold_14714 10 5959 bp 31.90 3.58 59.81
SCNpilot_cont_300_bf_scaffold_4147 10 5531 bp 33.68 3.72 64.06
SCNpilot_cont_300_bf_scaffold_9571 10 10689 bp 30.72 4.02 68.34
SCNpilot_cont_300_bf_scaffold_12763 10 7597 bp 33.59 3.96 37.75
SCNpilot_cont_300_bf_scaffold_4929 10 7900 bp 33.22 3.81 59.58
SCNpilot_cont_300_bf_scaffold_2887
Domain: Metazoa (50%)
10 8766 bp 32.91 3.44 41.44
SCNpilot_cont_300_bf_scaffold_2379 10 8307 bp 31.49 3.96 48.18
SCNpilot_cont_300_bf_scaffold_13224 10 5084 bp 33.85 3.26 57.47
SCNpilot_cont_300_bf_scaffold_7009 10 5208 bp 31.66 5.06 47.24
SCNpilot_cont_300_bf_scaffold_4952 10 7288 bp 34.39 3.79 42.69
SCNpilot_cont_300_bf_scaffold_5936 10 6212 bp 31.66 4.20 40.52
SCNpilot_cont_300_bf_scaffold_7274 10 7000 bp 33.09 3.51 34.80
SCNpilot_cont_300_bf_scaffold_16615 10 6860 bp 33.97 4.13 40.19
SCNpilot_cont_300_bf_scaffold_3776 10 5894 bp 34.93 3.75 63.88
SCNpilot_cont_300_bf_scaffold_3012
Domain: Metazoa (50%)
10 7512 bp 33.83 4.04 39.50
SCNpilot_cont_300_bf_scaffold_5189 10 7048 bp 32.11 3.38 52.53
SCNpilot_cont_300_bf_scaffold_2929 10 10647 bp 34.70 3.94 57.48
SCNpilot_cont_300_bf_scaffold_4466 10 6261 bp 32.49 4.85 50.50
SCNpilot_cont_300_bf_scaffold_19026
Domain: Metazoa (60%)
10 6819 bp 35.90 3.86 59.92
SCNpilot_cont_300_bf_scaffold_5207 10 6218 bp 31.36 4.12 46.65
SCNpilot_cont_300_bf_scaffold_7313 10 6726 bp 33.75 3.06 54.19
Displaying items 101-150 of 803 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.