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SCNpilot_cont_300_bf_scaffold_933

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_933_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
Outer membrane efflux protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF88_NITHX
outer membrane efflux protein
Divalent cation transporter {ECO:0000313|EMBL:KIZ44768.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomon
SCNpilot_cont_300_bf_scaffold_933_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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138..1088
DNA (951bp) protein (317aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF87_NITHX rbh
Hemolysin D {ECO:0000313|EMBL:KIZ44805.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD
SCNpilot_cont_300_bf_scaffold_933_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1078..1443
DNA (366bp) protein (122aa)
Nitrogen regulatory protein P-II (GlnB, GlnK) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF86_NITHX
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KIZ44769.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseu
nitrogen regulatory protein P-II (GlnB, GlnK)
SCNpilot_cont_300_bf_scaffold_933_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1436..4645
DNA (3210bp) protein (1070aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF85_NITHX rbh
Cation transporter {ECO:0000313|EMBL:KIZ44770.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palust
heavy metal efflux pump CzcA
SCNpilot_cont_300_bf_scaffold_933_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4695..5153
DNA (459bp) protein (153aa)
Methionyl-tRNA formyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXK4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ44771.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5197..7404
DNA (2208bp) protein (736aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF84_NITHX rbh
ATPase {ECO:0000313|EMBL:KIZ44806.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
heavy metal translocating P-type ATPase
SCNpilot_cont_300_bf_scaffold_933_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7443..7757
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRN9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ44772.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7807..7998
DNA (192bp) protein (64aa)
Type IV pilus assembly PilZ n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF83_NITHX
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABE65114.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambu
SCNpilot_cont_300_bf_scaffold_933_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8100..8609
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF82_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ44807.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8613..9467
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG72_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ44773.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9470..10369
DNA (900bp) protein (300aa)
Cobalt-zinc-cadmium resistance protein CzcD n=2 Tax=Oligotropha carboxidovorans RepID=B6JHP8_OLICO rbh
Cation transporter {ECO:0000313|EMBL:KIZ44774.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palust
zinc transporter ZitB
SCNpilot_cont_300_bf_scaffold_933_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12386..14845)
DNA (2460bp) protein (820aa)
Copper-translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFM6_NITHX rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KIZ44775.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
copper-translocating P-type ATPase
SCNpilot_cont_300_bf_scaffold_933_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14899..15174
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P2_9BRAD
Copper-sensing transcriptional repressor CsoR family protein {ECO:0000313|EMBL:KIZ44776.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseu
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15270..15746
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ44777.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15826..16125
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQX2_OLICM
Uncharacterized protein {ECO:0000313|EMBL:KIZ44778.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_933_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16135..17592
DNA (1458bp) protein (486aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY7_OLICO rbh
Copper resistance protein {ECO:0000313|EMBL:KIZ44779.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
outer membrane efflux protein
SCNpilot_cont_300_bf_scaffold_933_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17604..18986
DNA (1383bp) protein (461aa)
Multicopper oxidase type 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N8_9BRAD
Copper oxidase {ECO:0000313|EMBL:KIZ44808.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.
multicopper oxidase, TAT pathway translocated
SCNpilot_cont_300_bf_scaffold_933_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19110..19733
DNA (624bp) protein (208aa)
Cytochrome c family protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF01_NITHX
Cytochrome C {ECO:0000313|EMBL:KIZ44809.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c family protein
SCNpilot_cont_300_bf_scaffold_933_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19730..19930
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ44780.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
SCNpilot_cont_300_bf_scaffold_933_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19992..20387
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ44781.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
Displaying 20 items

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