ggKbase home page

SCNpilot_cont_300_bf_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_44_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..90
DNA (90bp) protein (30aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UYA8_9RHIZ
glutathione-dependent formaldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_44_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165..608
DNA (444bp) protein (148aa)
UPF0178 protein RTCIAT899_CH09525 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMJ3_RHITR
hypothetical protein
UPF0178 protein RTCIAT899_CH09525 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
SCNpilot_cont_300_bf_scaffold_44_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

626..1462
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKQ1_RHITR rbh
fghA; S-formylglutathione hydrolase rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:AGB71291.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_44_4
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1597..1911
DNA (315bp) protein (105aa)
Cation/cationic drug transporter n=1 Tax=Rhizobium sp. AP16 RepID=J2DGE1_9RHIZ
Cation/cationic drug transporter {ECO:0000313|EMBL:EJK81892.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacter
sugE; small multidrug resistance protein
SCNpilot_cont_300_bf_scaffold_44_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1923..2309)
DNA (387bp) protein (129aa)
DoxX family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIP6_RHITR
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AGB71293.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
SCNpilot_cont_300_bf_scaffold_44_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2447..2839)
DNA (393bp) protein (131aa)
DoxX family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMG5_RHITR
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AGB71294.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
SCNpilot_cont_300_bf_scaffold_44_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2963..4495)
DNA (1533bp) protein (511aa)
Propionyl-CoA carboxylase beta chain n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMJ8_RHITR rbh
propionyl-CoA carboxylase beta chain
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:AGB71295.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
SCNpilot_cont_300_bf_scaffold_44_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..5028)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDK1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89127.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_44_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5098..5883)
DNA (786bp) protein (262aa)
ATP12 ATPase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ72_RHITR rbh
ATP12 ATPase rbh
ATP12 ATPase {ECO:0000313|EMBL:AGB71297.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobiu
SCNpilot_cont_300_bf_scaffold_44_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5893..6546)
DNA (654bp) protein (218aa)
Putative hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIP9_RHITR rbh
putative hydrolase rbh
Putative hydrolase {ECO:0000313|EMBL:AGB71298.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rh
SCNpilot_cont_300_bf_scaffold_44_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6543..7604)
DNA (1062bp) protein (354aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
Pseudouridine synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMG9_RHITR rbh
ribosomal large subunit pseudouridine synthase C
SCNpilot_cont_300_bf_scaffold_44_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..8260)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMK2_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB71300.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_44_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8665..9801
DNA (1137bp) protein (379aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
Aminomethyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ78_RHITR rbh
gcvT; glycine cleavage system T protein rbh
SCNpilot_cont_300_bf_scaffold_44_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9827..10189
DNA (363bp) protein (121aa)
Glycine cleavage system H protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7J0_9RHIZ
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
gcvH; glycine cleavage system H protein
SCNpilot_cont_300_bf_scaffold_44_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10189..13053
DNA (2865bp) protein (955aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMH3_RHITR rbh
gcvP; glycine dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_44_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13201..13821
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UG46_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN89133.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_44_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14089
DNA (267bp) protein (89aa)
Putative transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9B2_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:ENN89134.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
putative addiction module antidote protein
SCNpilot_cont_300_bf_scaffold_44_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14117..14821)
DNA (705bp) protein (235aa)
Integral membrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKR7_RHITR rbh
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AGB71306.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_44_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14936..15325)
DNA (390bp) protein (130aa)
FeS assembly scaffold SufA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ84_RHITR
sufA; FeS assembly scaffold SufA
FeS assembly scaffold SufA {ECO:0000313|EMBL:AGB71307.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
SCNpilot_cont_300_bf_scaffold_44_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15402..15782)
DNA (381bp) protein (127aa)
FeS assembly SUF system protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIQ8_RHITR
FeS assembly SUF system protein
FeS assembly SUF system protein {ECO:0000313|EMBL:AGB71308.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_44_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15794..17035)
DNA (1242bp) protein (414aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizo
Cysteine desulfurase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMH7_RHITR rbh
cysteine desulfurase rbh
SCNpilot_cont_300_bf_scaffold_44_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17051..18325)
DNA (1275bp) protein (425aa)
FeS assembly protein SufD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMK9_RHITR rbh
sufD; FeS assembly protein SufD rbh
FeS assembly protein SufD {ECO:0000313|EMBL:AGB71310.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_44_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18348..19103)
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKS3_RHITR rbh
sufC; FeS assembly ATPase SufC rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:AGB71311.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_44_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19175..20644)
DNA (1470bp) protein (490aa)
ABC transporter membrane protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9B7_9RHIZ rbh
ABC transporter membrane protein {ECO:0000313|EMBL:ENN89139.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
sufB; FeS assembly protein SufB rbh
SCNpilot_cont_300_bf_scaffold_44_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20791..21957)
DNA (1167bp) protein (389aa)
Cysteine desulfurase n=2 Tax=Rhizobium tropici RepID=L0LIR3_RHITR rbh
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:AGB71313.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
SCNpilot_cont_300_bf_scaffold_44_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22191..22868
DNA (678bp) protein (226aa)
Alpha/beta hydrolase n=2 Tax=Rhizobium RepID=L0LMI2_RHITR rbh
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AGB71314.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
SCNpilot_cont_300_bf_scaffold_44_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22934..23449)
DNA (516bp) protein (172aa)
Acetyltransferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LML5_RHITR rbh
acetyltransferase protein rbh
Acetyltransferase protein {ECO:0000313|EMBL:AGB71315.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_44_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23632..25875)
DNA (2244bp) protein (748aa)
Peptidase C12, subunit p20 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKS8_RHITR rbh
peptidase C12, subunit p20 rbh
Peptidase C12, subunit p20 {ECO:0000313|EMBL:AGB71316.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
SCNpilot_cont_300_bf_scaffold_44_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26303..27559
DNA (1257bp) protein (419aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9C0_9RHIZ rbh
tyrosyl-tRNA synthetase rbh
SCNpilot_cont_300_bf_scaffold_44_30
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27662..28558)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2K3_BRAJP rbh
Hydrolase {ECO:0000313|EMBL:KGT75767.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hydrolase
Displaying items 1-30 of 265 in total

View Taxonomy