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SCNpilot_cont_300_bf_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_100_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87..401
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T130_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ31233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_100_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(587..1255)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D108B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ30067.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_100_3
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1519..2148
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BZC2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ09803.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_100_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2199..4061)
DNA (1863bp) protein (621aa)
Putative ATP-dependent hydrolase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBB1_9RHIZ rbh
Putative ATP-dependent hydrolase protein {ECO:0000313|EMBL:ENN89819.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
ATP-dependent Zn protease
SCNpilot_cont_300_bf_scaffold_100_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4058..4372)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035F81A3
Uncharacterized protein {ECO:0000313|EMBL:KFL30631.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_300_bf_scaffold_100_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4525..4836
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7L1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89820.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
helix-turn-helix protein
SCNpilot_cont_300_bf_scaffold_100_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..5481
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71532.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_100_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5783..6802
DNA (1020bp) protein (340aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJF0_RHITR rbh
transcriptional regulator, AraC family rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB71533.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_100_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6843..8174)
DNA (1332bp) protein (444aa)
Two component response regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN51_RHITR rbh
two component response regulator rbh
Two component response regulator {ECO:0000313|EMBL:AGB71534.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
SCNpilot_cont_300_bf_scaffold_100_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8369..9190)
DNA (822bp) protein (274aa)
Two-component response regulator protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN88_RHITR rbh
two-component response regulator protein rbh
Two-component response regulator protein {ECO:0000313|EMBL:AGB71535.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
SCNpilot_cont_300_bf_scaffold_100_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9348..11942)
DNA (2595bp) protein (865aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF1_RHITR rbh
small-conductance mechanosensitive channel rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AGB71536.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_100_12
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12224..13240)
DNA (1017bp) protein (339aa)
Hemin transport system permease protein HmuU n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV3_9RHIZ rbh
transmembrane permease component of heme ABC transporter
Transmembrane permease component of heme ABC transporter {ECO:0000313|EMBL:AHK44688.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/E
SCNpilot_cont_300_bf_scaffold_100_13
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13303..14262)
DNA (960bp) protein (320aa)
ABC transporter substrate binding protein (Iron) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K021_AGRVS rbh
ABC transporter substrate binding protein (iron)
ABC transporter substrate binding protein (Iron) {ECO:0000313|EMBL:ACM38219.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_100_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14283..15062)
DNA (780bp) protein (260aa)
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I4_9RHIZ
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP76271.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ens
putative ABC transporter component
SCNpilot_cont_300_bf_scaffold_100_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15072..15485)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS51255.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_100_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16001..17416)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX8_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB71537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_100_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18131..19348
DNA (1218bp) protein (406aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN56_RHITR rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB71539.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source
SCNpilot_cont_300_bf_scaffold_100_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19371..19838)
DNA (468bp) protein (156aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN91_RHITR
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AGB71540.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_100_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20045..21505)
DNA (1461bp) protein (487aa)
FAD dependent oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF6_RHITR rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGB71541.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_100_20
unknown

Not on your lists

21811..21915
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_100_21
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(22030..22800)
DNA (771bp) protein (257aa)
Streptomycin 3''-adenylyltransferase, putative {ECO:0000313|EMBL:EEF23115.1}; EC=2.7.7.47 {ECO:0000313|EMBL:EEF23115.1};; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta;
streptomycin 3''-adenylyltransferase (EC:2.7.7.47)
Streptomycin 3''-adenylyltransferase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TLZ9_RICCO rbh
SCNpilot_cont_300_bf_scaffold_100_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23111..23233
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71543.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_100_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23410..23706
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN63_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71544.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_100_24
unknown

Not on your lists

23953..24141
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_100_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24579..25508)
DNA (930bp) protein (310aa)
Putative phenazine antibiotic biosynthesis protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4W5_9RHIZ rbh
Putative phenazine antibiotic biosynthesis protein {ECO:0000313|EMBL:ENN87649.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
phenazine biosynthesis protein PhzF family
SCNpilot_cont_300_bf_scaffold_100_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25565..26305)
DNA (741bp) protein (247aa)
Nudix hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJY8_RHITR rbh
nudix hydrolase
Nudix hydrolase {ECO:0000313|EMBL:AGB71547.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizo
SCNpilot_cont_300_bf_scaffold_100_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26302..27417)
DNA (1116bp) protein (372aa)
Putative endonuclease/exonuclease/phosphatase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG7_RHITR rbh
putative endonuclease/exonuclease/phosphatase rbh
Putative endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AGB71548.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
SCNpilot_cont_300_bf_scaffold_100_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27466..28461)
DNA (996bp) protein (332aa)
2OG-Fe(II) oxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V9G6_9RHIZ rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ENN87652.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
oxidoreductase, 2OG-Fe(II) oxygenase family rbh
SCNpilot_cont_300_bf_scaffold_100_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28539..29570)
DNA (1032bp) protein (344aa)
Iron(III) ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBX9_9RHIZ rbh
Iron(III) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN87653.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
Fe(3+) ABC transporter, ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_100_30
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29558..31252)
DNA (1695bp) protein (565aa)
Molybdenum (Or ferric iron) transport system permease protein ModB n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4X1_9RHIZ rbh
Molybdenum (Or ferric iron) transport system permease protein ModB {ECO:0000313|EMBL:ENN87654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizob
Fe(3+) ABC transporter, permease protein rbh
Displaying items 1-30 of 181 in total

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