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SCNpilot_cont_300_bf_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_397_1
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1243)
DNA (1242bp) protein (414aa)
UPI0003CE19A0 related cluster n=1 Tax=unknown RepID=UPI0003CE19A0
Uncharacterized protein {ECO:0000313|EMBL:ESW64446.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_397_2
unknown

Not on your lists

1861..2013
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_397_3
unknown

Not on your lists

comp(2010..2246)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_397_4
unknown

Not on your lists

comp(2246..2410)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_397_5
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(2438..2860)
DNA (423bp) protein (141aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TEI3_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25729.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; e
SCNpilot_cont_300_bf_scaffold_397_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3582..3896
DNA (315bp) protein (105aa)
Putative chorismate mutase n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XTP6_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIF61392.1}; Flags: Fragment;; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
SCNpilot_cont_300_bf_scaffold_397_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4072..4530
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY33_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75035.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_397_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4644..5117)
DNA (474bp) protein (158aa)
Putative transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UF80_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:ENN88828.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
GntR family transcriptional regulator protein
SCNpilot_cont_300_bf_scaffold_397_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5098..5376)
DNA (279bp) protein (93aa)
Putative transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UF80_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:ENN88828.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
putative GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_397_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5557..6585
DNA (1029bp) protein (343aa)
Proline racemase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6N2_9RHIZ rbh
Proline racemase {ECO:0000313|EMBL:ENN88826.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
proline racemase
SCNpilot_cont_300_bf_scaffold_397_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6672..8411
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4L7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88825.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
calT6; protein CalT6
SCNpilot_cont_300_bf_scaffold_397_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8489..10339
DNA (1851bp) protein (617aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8C2_9RHIZ rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ENN88824.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
ABC transporter ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_397_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..11304
DNA (969bp) protein (323aa)
Dipeptide transport system permease protein DppC n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UF74_9RHIZ rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:ENN88823.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
appC; oligopeptide transport system permease AppC
SCNpilot_cont_300_bf_scaffold_397_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11301..12254
DNA (954bp) protein (318aa)
Putative peptide transport system permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VCN8_9RHIZ rbh
Putative peptide transport system permease protein {ECO:0000313|EMBL:ENN88822.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
peptide transport system permease protein
SCNpilot_cont_300_bf_scaffold_397_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12264..13565
DNA (1302bp) protein (434aa)
proline iminopeptidase (EC:3.4.11.5)
Putative proline iminopeptidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6M5_9RHIZ rbh
Putative proline iminopeptidase {ECO:0000313|EMBL:ENN88821.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_397_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13562..15376
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4L2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88820.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
X-Pro aminopeptidase
SCNpilot_cont_300_bf_scaffold_397_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15670..17274)
DNA (1605bp) protein (535aa)
Transcriptional regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5J0_9RHIZ rbh
rtcR; sigma54-dependent transcriptional activator RtcR rbh
Sigma54-dependent transcriptional activator RtcR {ECO:0000313|EMBL:AIC30517.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_397_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17485..19041
DNA (1557bp) protein (519aa)
TROVE domain protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JEQ5_AGRRK rbh
TROVE domain-containing protein
TROVE domain protein {ECO:0000313|EMBL:ACM28474.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
SCNpilot_cont_300_bf_scaffold_397_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19580..20986
DNA (1407bp) protein (469aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
RNA-splicing ligase RtcB n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VZ81_RHILT rbh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_397_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21199..22473)
DNA (1275bp) protein (425aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit (EC:4.1.2.40)
Putative tagatose 6-phosphate kinase kbaZ n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UD25_9RHIZ rbh
Putative tagatose 6-phosphate kinase kbaZ {ECO:0000313|EMBL:ENN88058.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_397_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22470..23432)
DNA (963bp) protein (321aa)
Ribokinase-like domain-containing protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U624_9RHIZ rbh
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:ENN88059.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_397_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23429..24424)
DNA (996bp) protein (332aa)
Ribose transport system permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2K2_9RHIZ rbh
Ribose transport system permease protein {ECO:0000313|EMBL:ENN88060.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
branched-chain amino acid transport system / permease component family protein
SCNpilot_cont_300_bf_scaffold_397_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24421..25965)
DNA (1545bp) protein (515aa)
Ribose import ATP-binding protein rbsA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4N5_9RHIZ rbh
Ribose import ATP-binding protein rbsA {ECO:0000313|EMBL:ENN88061.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_397_24
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26115..27017)
DNA (903bp) protein (301aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X293_9RHIZ
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI14924.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="
monosaccharide-transporting ATPase
SCNpilot_cont_300_bf_scaffold_397_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27374..28402
DNA (1029bp) protein (343aa)
Periplasmic binding protein/LacI transcriptional regulator/transcriptional repressor RbsR n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UD34_9RHIZ rbh
Periplasmic binding protein/LacI transcriptional regulator/transcriptional repressor RbsR {ECO:0000313|EMBL:ENN88063.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
putative transcriptional regulator protein, LacI family rbh
SCNpilot_cont_300_bf_scaffold_397_26
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28702..29436
DNA (735bp) protein (245aa)
Bacterial regulatory protein, GntR family protein 58 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVB4_ACHXA rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGY26777.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_397_27
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29449..30297
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVB3_ACHXA
Permease {ECO:0000313|EMBL:KGY26776.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxyda
hypothetical protein
SCNpilot_cont_300_bf_scaffold_397_28
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30307..30627
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003047132
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP18685.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
SCNpilot_cont_300_bf_scaffold_397_29
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30744..31973)
DNA (1230bp) protein (410aa)
UPI0003CEC200 related cluster n=1 Tax=unknown RepID=UPI0003CEC200 rbh
Gluconate 2-dehydrogenase (Acceptor) rbh
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:CDN50851.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizo
SCNpilot_cont_300_bf_scaffold_397_30
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31970..33736)
DNA (1767bp) protein (589aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhizobium sp. CF080 RepID=J2K3H7_9RHIZ rbh
Gluconate 2-dehydrogenase flavoprotein rbh
Gluconate 2-dehydrogenase flavoprotein {ECO:0000313|EMBL:CDN56999.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhi
Displaying items 1-30 of 52 in total

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