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SCNpilot_cont_300_bf_scaffold_288_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_strain_fragment_60_19

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 19465..20187

Top 3 Functional Annotations

Value Algorithm Source
Octopine ABC transporter, permease n=1 Tax=Rhizobium sp. Pop5 RepID=K0WDW5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 228.0
  • Bit_score: 300
  • Evalue 1.40e-78
  • rbh
occM-1; octopine ABC transporter permease protein OccM 1 similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 227.0
  • Bit_score: 299
  • Evalue 6.90e-79
Octopine ABC transporter permease protein OccM 1 {ECO:0000313|EMBL:AIC27347.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 227.0
  • Bit_score: 299
  • Evalue 3.40e-78

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGATCGATTTCGGTTTTCTCTGGCAGGCTTTCGTCAGGCTCATTGCCGGTTTGCCTATTACGCTCGAATTGGCCGCAACGGCGATACTTGTCGGGACAGTCCTGGCAACAGCCCTGGCGATTGTTGCGCACCTGCGGGTCCCCGTCGCTTCCCAATGCGTTGCCTTTTTCGTCTTTTGCATACGCGGCTCGCCGCTCCTCCTGCAGATGTTCATCATCTACTACGGCCTCGGACAGTTCCGTCACGAACTCCAGAGTTGGGGTGTCTGGCCGTTTTTCCGTGAACCTTACTGGTGCGCCATCACTGCTCTAGTGCTTAGCGTCGGCGCCTATGGAAGTGAGATCATCCGCGGAGGGCTAAAGTCCGTTTCGGCCGGATTGATTGAGGCGGCAAGGGCTTGCGGCATGTCCGGTTTTCTACTGTACAGGCGCATCATCCTTCCGATCGCATTCCGGCAGGCTTTGCCAGCCTACGGCAATGAAGTCATTCTCGCGGTAAAAGCAACTTCCCTCGCTTCCACCATCACCATCATGGAAGTAACTGGTATAGCTGCGGAGCTAATCTCCCAGACATTTCGCGCTTTCGAAGTGTTTATCGTCGCTGGTGCAATTTATCTGACGCTCAACTTCATAATAACCCGCCTGATCGCTCTACTTGAATACCGTCTGTCACCGCATCAGCGCGATCTCCCCGTCAAAACAAACATTGAGGCGCGGCCATGA
PROTEIN sequence
Length: 241
VIDFGFLWQAFVRLIAGLPITLELAATAILVGTVLATALAIVAHLRVPVASQCVAFFVFCIRGSPLLLQMFIIYYGLGQFRHELQSWGVWPFFREPYWCAITALVLSVGAYGSEIIRGGLKSVSAGLIEAARACGMSGFLLYRRIILPIAFRQALPAYGNEVILAVKATSLASTITIMEVTGIAAELISQTFRAFEVFIVAGAIYLTLNFIITRLIALLEYRLSPHQRDLPVKTNIEARP*