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SCNpilot_cont_300_bf_scaffold_288

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_288_1
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63..734)
DNA (672bp) protein (224aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CIS9_9RHIZ
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJN06724.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacter
amino acid ABC transporter
SCNpilot_cont_300_bf_scaffold_288_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1100..2452)
DNA (1353bp) protein (451aa)
Opine oxidase subunit A (Octopine oxidase subunit A) {ECO:0000313|EMBL:KFC71673.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71673.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D787A8
putative NAD(FAD)-dependent dehydrogenase
SCNpilot_cont_300_bf_scaffold_288_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2708..3904)
DNA (1197bp) protein (399aa)
Opine oxidase subunit B (Octopine oxidase subunit B) {ECO:0000313|EMBL:KFC71671.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71671.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003070D33
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_288_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4179..4796)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY84_BORPD
TetR family transcriptional regulator
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:CAP40697.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
SCNpilot_cont_300_bf_scaffold_288_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5129..5878
DNA (750bp) protein (250aa)
Electron transfer flavoprotein, beta subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3U5_9RHIZ rbh
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:ENN88530.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
electron transfer flavoprotein subunit beta
SCNpilot_cont_300_bf_scaffold_288_6
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5906..6841
DNA (936bp) protein (312aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN21_RHITR
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KJF69979.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
electron transfer flavoprotein subunit alpha
SCNpilot_cont_300_bf_scaffold_288_7
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6891..7766
DNA (876bp) protein (292aa)
D-amino acid aminotransferase {ECO:0000313|EMBL:KEQ10612.1}; EC=2.6.1.21 {ECO:0000313|EMBL:KEQ10612.1};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
D-alanine aminotransferase (EC:2.6.1.21)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036C416F rbh
SCNpilot_cont_300_bf_scaffold_288_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..9524
DNA (1671bp) protein (557aa)
glutamate synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DFF127 rbh
Glutamate synthase {ECO:0000313|EMBL:EZQ13084.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis
glutamate synthase domain-containing protein
SCNpilot_cont_300_bf_scaffold_288_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9671..10873)
DNA (1203bp) protein (401aa)
Beta-ketoadipyl CoA thiolase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QID8_9RHIZ
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:EKF60876.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu
beta-ketoadipyl CoA thiolase PcaF
SCNpilot_cont_300_bf_scaffold_288_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10902..12926)
DNA (2025bp) protein (675aa)
Peroxisomal bifunctional enzyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLW7_RHITR
peroxisomal bifunctional enzyme
Peroxisomal bifunctional enzyme {ECO:0000313|EMBL:AGB72237.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_288_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13025..14176)
DNA (1152bp) protein (384aa)
Butyryl-CoA dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBR0_AZOL4 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EXL10530.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluv
dcaA; butyryl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_288_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14395..15771)
DNA (1377bp) protein (459aa)
Gamma aminobutyrate transaminase 1, mitochondrial {ECO:0000313|EMBL:CDX13138.1}; EC=2.6.1.96 {ECO:0000313|EMBL:CDX13138.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DC0E6D
aminotransferase
SCNpilot_cont_300_bf_scaffold_288_13
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15834..16631)
DNA (798bp) protein (266aa)
Cystine-binding protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H5Q5_CAUCN
Cystine transporter subunit {ECO:0000313|EMBL:KGT95994.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typogr
cystine transporter subunit
SCNpilot_cont_300_bf_scaffold_288_14
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16719..17564)
DNA (846bp) protein (282aa)
Extracellular solute-binding protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J260_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EMG53031.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_288_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17717..18331)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00037B353E
TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:EYR82229.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shine
SCNpilot_cont_300_bf_scaffold_288_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18718..19461
DNA (744bp) protein (248aa)
Octopine ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I299_9RHIZ rbh
Octopine ABC transporter permease {ECO:0000313|EMBL:EHK52898.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
putative amino acid ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_288_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19465..20187
DNA (723bp) protein (241aa)
Octopine ABC transporter, permease n=1 Tax=Rhizobium sp. Pop5 RepID=K0WDW5_9RHIZ rbh
occM-1; octopine ABC transporter permease protein OccM 1
Octopine ABC transporter permease protein OccM 1 {ECO:0000313|EMBL:AIC27347.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_288_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20184..20978
DNA (795bp) protein (265aa)
ABC-type histidine transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2DAG9_9RHIZ
Amino acid transporter {ECO:0000313|EMBL:KJF72738.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
occPch; octopine ABC transporter
SCNpilot_cont_300_bf_scaffold_288_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21242..22459
DNA (1218bp) protein (406aa)
CoA transferase n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVF1_PSEST rbh
CoA transferase {ECO:0000313|EMBL:EQM81228.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28
CoA-transferase
SCNpilot_cont_300_bf_scaffold_288_20
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22465..23220
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037B9434
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCB45352.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordet
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_288_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23223..24458
DNA (1236bp) protein (412aa)
Aspartate aminotransferase B {ECO:0000313|EMBL:CDX11417.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX11417.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriace
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C80_MESSB
SCNpilot_cont_300_bf_scaffold_288_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24476..24979
DNA (504bp) protein (168aa)
Putative acetolactate synthase large subunit IlvX {ECO:0000313|EMBL:CDX11426.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDX11426.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035DF229
hypothetical protein
SCNpilot_cont_300_bf_scaffold_288_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24936..26006
DNA (1071bp) protein (357aa)
Putative acetolactate synthase large subunit IlvX {ECO:0000313|EMBL:CDX11426.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDX11426.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035DF229
hypothetical protein
SCNpilot_cont_300_bf_scaffold_288_24
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26069..27517
DNA (1449bp) protein (483aa)
Aldehyde dehydrogenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QX22_RALPI rbh
Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDN48112.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source
SCNpilot_cont_300_bf_scaffold_288_25
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27591..28841
DNA (1251bp) protein (417aa)
Sarcosine oxidase beta subunit n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CG90_AGRT5
soxB; sarcosine oxidase beta subunit
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:AAK89215.1}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
SCNpilot_cont_300_bf_scaffold_288_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28866..29138
DNA (273bp) protein (91aa)
soxD2; sarcosine oxidase subunit delta (EC:1.5.3.1)
sarcosine oxidase subunit delta n=1 Tax=Rhizobium mongolense RepID=UPI0003B681ED
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:KDR89558.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
SCNpilot_cont_300_bf_scaffold_288_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29135..32095
DNA (2961bp) protein (987aa)
sarcosine oxidase subunit alpha n=1 Tax=Rhizobium radiobacter RepID=UPI00035DC4BA
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EPR07337.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
soxA; sarcosine oxidase alpha subunit
SCNpilot_cont_300_bf_scaffold_288_28
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32088..32621
DNA (534bp) protein (178aa)
soxG2; sarcosine oxidase subunit gamma (EC:1.5.3.1)
Sarcosine oxidase, gamma subunit {ECO:0000313|EMBL:ACP25206.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACP25206.1};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
Sarcosine oxidase, gamma subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MCC7_RHISN
SCNpilot_cont_300_bf_scaffold_288_29
Brucella pinnipedialis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32651..33811
DNA (1161bp) protein (387aa)
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=10 Tax=Brucella RepID=C9TUL7_BRUPB
Cystathionine beta-lyase {ECO:0000313|EMBL:EEZ30893.1}; TaxID=520462 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella pinnipedialis M292/
SCNpilot_cont_300_bf_scaffold_288_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33808..35472
DNA (1665bp) protein (555aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:EYR81198.1}; EC=1.5.5.1 {ECO:0000313|EMBL:EYR81198.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria;
etf; electron transfer flavoprotein-ubiquinone oxidoreductase/putative oxidoreductase (EC:1.5.5.1) rbh
Electron transfer flavoprotein-ubiquinone oxidoreductase/ putative oxidoreductase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEE0_RHISN rbh
Displaying items 1-30 of 105 in total

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