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SCNpilot_cont_300_bf_scaffold_3638

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3638_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1303)
DNA (1302bp) protein (434aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium gallicum RepID=UPI000377B778 rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHF83411.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_3638_2
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1422..1943
DNA (522bp) protein (174aa)
Acetyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N9F9_RHILT
acetyltransferase
Probable acetyltransferase protein {ECO:0000313|EMBL:EAV41799.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia
SCNpilot_cont_300_bf_scaffold_3638_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1961..3715)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZB9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAV41798.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3638_4
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4008..5234
DNA (1227bp) protein (409aa)
Probable transcriptional regulator protein, ROK family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZB8_9RHOB rbh
Probable transcriptional regulator protein, ROK family protein {ECO:0000313|EMBL:EAV41797.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; La
ROK family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_3638_5

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comp(5238..5900)
DNA (663bp) protein (221aa)
Putative transcriptional regulator GntR family protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8V9_9BACT
Putative transcriptional regulator GntR family protein {ECO:0000313|EMBL:ACF98115.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3638_6

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6315..7349
DNA (1035bp) protein (345aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8W0_9BACT
Putative sugar uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:ACF98116.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_3638_7

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7411..8322
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8W1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98117.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
ABC-type maltose/maltodextrin transport system, permease component
SCNpilot_cont_300_bf_scaffold_3638_8

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8319..9200
DNA (882bp) protein (294aa)
Putative ABC sugar transporter permease protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8W2_9BACT
Putative ABC sugar transporter permease protein {ECO:0000313|EMBL:ACF98118.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
putative sugar ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_3638_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9207..10259
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
mannonate dehydratase (EC:4.2.1.8)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8W3_9BACT
SCNpilot_cont_300_bf_scaffold_3638_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10351..10890
DNA (540bp) protein (180aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CDP52459.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CDP52459.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EM39_9RHOB
SCNpilot_cont_300_bf_scaffold_3638_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10940..11233)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D151F
hypothetical protein
Lectin-like protein BA14k {ECO:0000313|EMBL:CDX52068.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plu
SCNpilot_cont_300_bf_scaffold_3638_12
unknown

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11457..11807
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3638_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11881..12348)
DNA (468bp) protein (156aa)
Ribose ABC transporter, periplasmic ribose-binding protein RbsB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R8_PELHB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB76471.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ribose ABC transporter, periplasmic ribose-binding protein RbsB
Displaying 13 items

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