ggKbase home page

SCNpilot_cont_300_bf_scaffold_3646

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3646_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..701
DNA (699bp) protein (233aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ8_PELHB
phospho-N-acetylmuramoyl-pentapeptide-transferase
SCNpilot_cont_300_bf_scaffold_3646_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(698..1102)
DNA (405bp) protein (135aa)
Gll1679 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NK02_GLOVI
hypothetical protein
Gll1679 protein {ECO:0000313|EMBL:BAC89620.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
SCNpilot_cont_300_bf_scaffold_3646_3
unknown

Not on your lists

comp(1099..1341)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3646_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1495..2661
DNA (1167bp) protein (389aa)
Cell division protein FtsW n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH3_PELHB
Cell division protein FtsW {ECO:0000313|EMBL:KFL27438.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.
cell division protein FtsW
SCNpilot_cont_300_bf_scaffold_3646_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2658..3752
DNA (1095bp) protein (365aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH2_PELHB
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase
SCNpilot_cont_300_bf_scaffold_3646_6
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3749..5173
DNA (1425bp) protein (475aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH1_PELHB
UDP-N-acetylmuramate--L-alanine ligase
SCNpilot_cont_300_bf_scaffold_3646_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5170..6123
DNA (954bp) protein (318aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase {ECO:
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH0_PELHB
UDP-N-acetylenolpyruvoylglucosamine reductase
SCNpilot_cont_300_bf_scaffold_3646_8
unknown

Not on your lists

6123..6320
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3646_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6317..7237
DNA (921bp) protein (307aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG9_PELHB
D-alanine--D-alanine ligase
SCNpilot_cont_300_bf_scaffold_3646_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7225..8196
DNA (972bp) protein (324aa)
Cell division protein FtsQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG8_PELHB
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devos
cell division protein FtsQ
SCNpilot_cont_300_bf_scaffold_3646_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8193..9506
DNA (1314bp) protein (438aa)
Cell division protein ftsA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG7_PELHB
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-
cell division protein FtsA
SCNpilot_cont_300_bf_scaffold_3646_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9655..11286
DNA (1632bp) protein (544aa)
Cell division protein FtsZ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG1_PELHB
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
cell division protein FtsZ
SCNpilot_cont_300_bf_scaffold_3646_13
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11389..12363
DNA (975bp) protein (325aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG0_PELHB
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase
SCNpilot_cont_300_bf_scaffold_3646_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12448..13347
DNA (900bp) protein (300aa)
Outer membrane protein assembly factor BamD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFF9_PELHB rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
competence lipoprotein ComL rbh
SCNpilot_cont_300_bf_scaffold_3646_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13441..15111
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFF8_PELHB
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
DNA repair protein RecN
SCNpilot_cont_300_bf_scaffold_3646_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15108..17264
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=443610 species="Bacteria
DNA ligase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFW2_MESOW
DNA ligase, NAD-dependent
SCNpilot_cont_300_bf_scaffold_3646_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17502..18005
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL28983.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_300_bf_scaffold_3646_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18002..19927)
DNA (1926bp) protein (642aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDP52555.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CDP52555.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Xaa-Pro aminopeptidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFF4_PELHB
Xaa-Pro aminopeptidase
SCNpilot_cont_300_bf_scaffold_3646_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20275..21144)
DNA (870bp) protein (290aa)
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:KFC66360.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC66360.1};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyp
Ribosomal protein L11 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFF2_PELHB
50S ribosomal protein L11 methyltransferase
SCNpilot_cont_300_bf_scaffold_3646_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21410..22495
DNA (1086bp) protein (362aa)
Acetolactate synthase large subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REX5_PELHB
Acetolactate synthase {ECO:0000313|EMBL:KFL28955.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetolactate synthase large subunit
Displaying 20 items

View Taxonomy