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SCNpilot_cont_300_bf_scaffold_1294

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1294_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..670
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHG9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49988.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
SCNpilot_cont_300_bf_scaffold_1294_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(814..2751)
DNA (1938bp) protein (646aa)
Small GTP-binding protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZVR4_RHILW
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:ACI55775.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_1294_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3114..3893
DNA (780bp) protein (260aa)
Putative periplasmic protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BL40_RHILV rbh
Putative periplasmic protein {ECO:0000313|EMBL:EJC66990.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1294_4
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3991..4716)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RGH9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK32847.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_300_bf_scaffold_1294_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4812..6029
DNA (1218bp) protein (406aa)
Oxygenase (Fragment) n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HI55_9PSEU
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ETK31642.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA
2-polyprenyl-6-methoxyphenol 4-hydroxylase
SCNpilot_cont_300_bf_scaffold_1294_6
unknown

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6031..6246
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1294_7
unknown

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6387..6644
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1294_8

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comp(7376..7903)
DNA (528bp) protein (176aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein id=12551701 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EKE17580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1294_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7918..9114)
DNA (1197bp) protein (399aa)
MFS permease n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AHM1_RHIFH rbh
MFS permease rbh
MFS permease {ECO:0000313|EMBL:CCF00553.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizo
SCNpilot_cont_300_bf_scaffold_1294_10
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9114..9467)
DNA (354bp) protein (118aa)
DsrE family protein n=1 Tax=mine drainage metagenome RepID=T1AQ28_9ZZZZ
Protein YchN {ECO:0000313|EMBL:GAK34390.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
Putative ACR protein
SCNpilot_cont_300_bf_scaffold_1294_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9549..10217
DNA (669bp) protein (223aa)
Transcriptional regulator, ArsR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJP7_BEII9
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACB94919.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijer
SCNpilot_cont_300_bf_scaffold_1294_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10214..11089
DNA (876bp) protein (292aa)
UPI0003CE7594 related cluster n=1 Tax=unknown RepID=UPI0003CE7594 rbh
Uridine phosphorylase {ECO:0000313|EMBL:ESW80431.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L
purine phosphorylase family 1
SCNpilot_cont_300_bf_scaffold_1294_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11118..11513
DNA (396bp) protein (132aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9M9_MESOW
membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:AEH88755.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
SCNpilot_cont_300_bf_scaffold_1294_14
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11775..13859
DNA (2085bp) protein (695aa)
nitrate reductase n=1 Tax=Spirosoma luteum RepID=UPI00035FA3E2
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ETD32813.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
nitrate reductase NarB
SCNpilot_cont_300_bf_scaffold_1294_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13960..14415
DNA (456bp) protein (152aa)
Cell division protein FtsH {ECO:0000313|EMBL:CDP53012.1}; EC=3.4.24.- {ECO:0000313|EMBL:CDP53012.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
AAA ATPase, central region n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13F79_RHOPS
AAA ATPase, central region
Displaying 15 items

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