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SCNpilot_cont_300_bf_scaffold_1436

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1436_1
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2302
DNA (2301bp) protein (767aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBF6_MESOW
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AEH87703.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriac
SCNpilot_cont_300_bf_scaffold_1436_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2331..3155)
DNA (825bp) protein (275aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXK2_TRURR
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IIA {ECO:0000313|EMBL:ADI14604.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" sou
SCNpilot_cont_300_bf_scaffold_1436_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3155..3898)
DNA (744bp) protein (248aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00036B0005
Uncharacterized protein {ECO:0000313|EMBL:KGM31578.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1436_4
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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4130..5401
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036FE5E7
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACL70254.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halot
SCNpilot_cont_300_bf_scaffold_1436_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5514..6800
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036FE5E7
Bicyclomycin resistance protein {ECO:0000313|EMBL:KGM35220.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilin
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_1436_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6860..7753
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037268F1
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13643.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_1436_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7737..8621
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZY0_RUBXD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG03048.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Ru
SCNpilot_cont_300_bf_scaffold_1436_8
unknown

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8618..8737
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1436_9
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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8745..10334
DNA (1590bp) protein (530aa)
hypothetical protein SpalD1_08054 id=4355247 bin=GWC2_Planctomycetes_45_44 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good rbh
hypothetical protein SpalD1_08054 Tax=GWC2_Planctomycetes_45_44_curated
SCNpilot_cont_300_bf_scaffold_1436_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10349..11317
DNA (969bp) protein (323aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BT8_RHOPB
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABD86148.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseu
SCNpilot_cont_300_bf_scaffold_1436_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11330..12769)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI0003698F7C rbh
Sulfatase {ECO:0000313|EMBL:KFL28826.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
sulfatase
SCNpilot_cont_300_bf_scaffold_1436_12
unknown

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comp(12883..12948)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 12 items

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