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SCNpilot_cont_300_bf_scaffold_1581

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1581_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
Putative transcriptional regulator n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JC5_RHOP5
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABJ07959.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodo
SCNpilot_cont_300_bf_scaffold_1581_2
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..718)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AEF62
Uncharacterized protein {ECO:0000313|EMBL:ETI60088.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1581_3
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(861..1073)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VTJ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03495.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" sour
SCNpilot_cont_300_bf_scaffold_1581_4
unknown

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1225..1521
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1581_5
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1628..1792
DNA (165bp) protein (55aa)
XRE family transcriptional regulator n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002E21FBE
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC40144.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brad
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1581_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1835..2161)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FU7_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63728.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
SCNpilot_cont_300_bf_scaffold_1581_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2748..3257)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSB9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56329.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hutD family protein
SCNpilot_cont_300_bf_scaffold_1581_8
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3285..4955)
DNA (1671bp) protein (557aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
UPI0003CE7506 related cluster n=1 Tax=unknown RepID=UPI0003CE7506
SCNpilot_cont_300_bf_scaffold_1581_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4952..5761)
DNA (810bp) protein (270aa)
hutG; formiminoglutamase (EC:3.5.3.8)
Formiminoglutamase protein {ECO:0000313|EMBL:ACE93423.1}; EC=3.5.3.8 {ECO:0000313|EMBL:ACE93423.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhi
Formiminoglutamase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q167_RHIE6
SCNpilot_cont_300_bf_scaffold_1581_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5763..7298)
DNA (1536bp) protein (512aa)
hutH1; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
histidine ammonia-lyase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003819966
SCNpilot_cont_300_bf_scaffold_1581_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7295..8527)
DNA (1233bp) protein (411aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
Imidazolonepropionase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U189_9RHIZ
hutI; imidazolonepropionase
SCNpilot_cont_300_bf_scaffold_1581_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8630..9976
DNA (1347bp) protein (449aa)
Formiminoglutamate deiminase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIE2_MESCW
formiminoglutamate deiminase
Formiminoglutamate deiminase {ECO:0000313|EMBL:ADV13644.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
SCNpilot_cont_300_bf_scaffold_1581_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10027..10767
DNA (741bp) protein (247aa)
Histidine utilization repressor protein n=2 Tax=Rhizobium etli RepID=S5S3F2_RHIET
histidine utilization repressor protein
Histidine utilization repressor protein {ECO:0000313|EMBL:AGS24693.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
SCNpilot_cont_300_bf_scaffold_1581_14
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10776..11666)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B32B70
LysR substrate-binding {ECO:0000313|EMBL:EFO81296.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillo
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1581_15
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11854..12372
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375DCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF79181.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecapti
SCNpilot_cont_300_bf_scaffold_1581_16
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12397..12810
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037E8B0D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF79182.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecapti
SCNpilot_cont_300_bf_scaffold_1581_17
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12977..13696
DNA (720bp) protein (240aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF142 RepID=J2KVB2_9RHIZ
Octopine ABC transporter
Octopine ABC transporter {ECO:0000313|EMBL:AHF79178.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecapt
SCNpilot_cont_300_bf_scaffold_1581_18
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13696..14430
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037FB708
Octopine ABC transporter
Octopine ABC transporter {ECO:0000313|EMBL:AHF79177.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecapt
SCNpilot_cont_300_bf_scaffold_1581_19
Pectobacterium atrosepticum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14427..14888
DNA (462bp) protein (154aa)
Octopine permease ATP-binding protein P n=1 Tax=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) RepID=Q6CZR7_ERWCT
occP; octopine permease ATP-binding protein P
Octopine permease ATP-binding protein P {ECO:0000313|EMBL:CAG76981.1}; TaxID=218491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" sou
Displaying 19 items

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