ggKbase home page

SCNpilot_cont_300_bf_scaffold_1718

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1718_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)
Putative alpha-galactosidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTM2_9RHIZ
Putative alpha-galactosidase {ECO:0000313|EMBL:ENN85045.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
melA; alpha-galactosidase
SCNpilot_cont_300_bf_scaffold_1718_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

508..1431
DNA (924bp) protein (308aa)
AraC family transcriptional regulator (EC:2.1.1.63)
Regulator of melibiose operon n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK10_9RHOB
Melibiose operon regulatory protein {ECO:0000313|EMBL:CDP53163.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
SCNpilot_cont_300_bf_scaffold_1718_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1752..2663
DNA (912bp) protein (304aa)
UPI0003D02890 related cluster n=1 Tax=unknown RepID=UPI0003D02890
Uncharacterized protein {ECO:0000313|EMBL:KFL31509.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glycine betaine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1718_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2692..3897
DNA (1206bp) protein (402aa)
ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983A6_RHILO
ABC transporter permease {ECO:0000313|EMBL:KKB08443.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1718_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..4832
DNA (939bp) protein (313aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMR6_9RHIZ
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31511.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_1718_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4829..5533
DNA (705bp) protein (235aa)
L-proline glycine betaine ABC transport system permease protein ProW n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7I7_PELHB
ABC transporter {ECO:0000313|EMBL:KKB86551.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
L-proline glycine betaine ABC transport system permease protein ProW
SCNpilot_cont_300_bf_scaffold_1718_7
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5546..7060
DNA (1515bp) protein (505aa)
UPI0003D022EE related cluster n=1 Tax=unknown RepID=UPI0003D022EE
MFS transporter {ECO:0000313|EMBL:KFL24889.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_300_bf_scaffold_1718_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7140..7988
DNA (849bp) protein (283aa)
PDZ/DHR/GLGF domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3S7_9RHIZ
PDZ/DHR/GLGF protein
PDZ/DHR/GLGF domain-containing protein {ECO:0000313|EMBL:EHH13595.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
SCNpilot_cont_300_bf_scaffold_1718_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7942..8295
DNA (354bp) protein (118aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YH06_MESOW
Respose regulatory protein {ECO:0000313|EMBL:CDX12680.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pl
LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1718_10
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8320..9672
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035DE7C3 rbh
Cytochrome P450 {ECO:0000313|EMBL:KHJ53433.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
cytochrome P450
SCNpilot_cont_300_bf_scaffold_1718_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9722..10621)
DNA (900bp) protein (300aa)
Rhizopine catabolism protein MocC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTX2_9RHIZ
Rhizopine catabolism protein MocC {ECO:0000313|EMBL:EYR81587.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.
rhizopine catabolism protein MocC
SCNpilot_cont_300_bf_scaffold_1718_12
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10623..11450)
DNA (828bp) protein (276aa)
inositol monophosphatase n=1 Tax=Rhizobium radiobacter RepID=UPI0003677128
Extragenic suppressor protein SuhB {ECO:0000313|EMBL:KKB83105.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insul
Extragenic suppressor protein SuhB
SCNpilot_cont_300_bf_scaffold_1718_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11443..12291)
DNA (849bp) protein (283aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QGW6_9RHIZ
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KKB86657.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
Glycerophosphoryl diester phosphodiesterase
SCNpilot_cont_300_bf_scaffold_1718_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12288..13337)
DNA (1050bp) protein (350aa)
ABC transporter, nucleotide binding/ATPase protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q689_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:KFL32216.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter, nucleotide binding/ATPase protein
SCNpilot_cont_300_bf_scaffold_1718_15
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13368..14198)
DNA (831bp) protein (277aa)
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI000365AC0E
ABC transporter permease {ECO:0000313|EMBL:KKB81128.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC-type spermidine/putrescine transport system, permease component II
SCNpilot_cont_300_bf_scaffold_1718_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14198..15079)
DNA (882bp) protein (294aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B39AA2 rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKB86668.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="D
ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_1718_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15076..15795)
DNA (720bp) protein (240aa)
ABC transporter substrate binding protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1G0_AGRVS
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB86654.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
SCNpilot_cont_300_bf_scaffold_1718_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15796..16224)
DNA (429bp) protein (143aa)
Putative outer membrane protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QV19_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB86654.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
Bacterial extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_1718_19
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16438..17325)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BD8AB
Ribokinase {ECO:0000313|EMBL:KJC57071.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ribokinase
SCNpilot_cont_300_bf_scaffold_1718_20
unknown

Not on your lists

17541..17846
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1718_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17973..19616)
DNA (1644bp) protein (548aa)
Putative ABC-type Fe3+ transport system, permease component n=1 Tax=Vibrio nigripulchritudo RepID=U4KIX8_9VIBR rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB86389.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
putative ABC-type Fe3+ transport system, permease component
SCNpilot_cont_300_bf_scaffold_1718_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19613..20380)
DNA (768bp) protein (256aa)
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9F2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08873.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter ATP-binding protein
Displaying 22 items

View Taxonomy