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SCNpilot_cont_300_bf_scaffold_1745

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1745_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115..744
DNA (630bp) protein (210aa)
Putative ABC transporter, permease component n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JDF4_9RHOB
ABC-type multidrug transport system, permease comp onent {ECO:0000313|EMBL:CDP53483.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;"
ABC-2 type transporter
SCNpilot_cont_300_bf_scaffold_1745_2
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(909..1460)
DNA (552bp) protein (184aa)
Isochorismatase hydrolase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ET31_STRRM
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ELQ82284.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimos
SCNpilot_cont_300_bf_scaffold_1745_3
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1457..1789)
DNA (333bp) protein (111aa)
membrane protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349776A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52547.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconaceto
SCNpilot_cont_300_bf_scaffold_1745_4
unknown

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comp(1850..2335)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1745_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2335..3666)
DNA (1332bp) protein (444aa)
SAF domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB89_9RHIZ
SAF domain-containing protein {ECO:0000313|EMBL:EHH10970.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
SAF domain-containing protein
SCNpilot_cont_300_bf_scaffold_1745_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3781..4821
DNA (1041bp) protein (347aa)
3-hydroxyisobutyryl-CoA hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU8_PELHB rbh
3-hydroxyisobutyryl-CoA hydrolase
3-hydroxyisobutyryl-CoA hydrolase {ECO:0000313|EMBL:AEQ53101.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagi
SCNpilot_cont_300_bf_scaffold_1745_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4925..5215
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB85302.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1745_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..5581
DNA (360bp) protein (120aa)
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB9_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB85301.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
SCNpilot_cont_300_bf_scaffold_1745_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5618..7858
DNA (2241bp) protein (747aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Signal transduction histidine kinase CheA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB8_PELHB
signal transduction histidine kinase CheA
SCNpilot_cont_300_bf_scaffold_1745_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7883..8371
DNA (489bp) protein (163aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB7_PELHB
Chemotaxis protein CheW {ECO:0000313|EMBL:KKB85299.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
positive regulator of CheA protein activity (CheW)
SCNpilot_cont_300_bf_scaffold_1745_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8988..9341)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07614.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1745_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9504..10115
DNA (612bp) protein (204aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG88_PELHB
chemotaxis protein CheD
SCNpilot_cont_300_bf_scaffold_1745_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10195..11715
DNA (1521bp) protein (507aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG87_PELHB
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KFC71820.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
methyl-accepting chemotaxis protein
SCNpilot_cont_300_bf_scaffold_1745_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11712..12563
DNA (852bp) protein (284aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hy
Chemotaxis protein methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG86_PELHB
chemotaxis protein CheR
SCNpilot_cont_300_bf_scaffold_1745_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12560..13603
DNA (1044bp) protein (348aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1228055 species="Bacteria; Proteobacteria; Alpha
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG85_PELHB rbh
chemotaxis response regulator protein-glutamate methylesterase CheB
SCNpilot_cont_300_bf_scaffold_1745_16
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13701..14090
DNA (390bp) protein (130aa)
Chemotaxis protein CheY n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG84_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKC32670.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
chemotaxis protein CheY
SCNpilot_cont_300_bf_scaffold_1745_17
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14251..16773
DNA (2523bp) protein (841aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32750.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative chemotaxis transducer
SCNpilot_cont_300_bf_scaffold_1745_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16824..17186
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC71828.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_cont_300_bf_scaffold_1745_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17222..17584
DNA (363bp) protein (121aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG83_PELHB
methylglyoxal synthase
SCNpilot_cont_300_bf_scaffold_1745_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17650..18477
DNA (828bp) protein (276aa)
Branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG82_PELHB
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KFL25403.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
branched-chain amino acid transport ATP-binding protein LivG
SCNpilot_cont_300_bf_scaffold_1745_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18477..19181
DNA (705bp) protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG81_PELHB
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KKB11020.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
branched-chain amino acid transport ATP-binding protein LivF
SCNpilot_cont_300_bf_scaffold_1745_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19185..20189
DNA (1005bp) protein (335aa)
High-affinity branched-chain amino acid transport system permease protein LivH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG80_PELHB
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KKB07735.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
high-affinity branched-chain amino acid transport system permease protein LivH
SCNpilot_cont_300_bf_scaffold_1745_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20186..21028
DNA (843bp) protein (281aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG79_PELHB
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KKB85282.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sourc
branched-chain amino acid transport system permease protein LivM
SCNpilot_cont_300_bf_scaffold_1745_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21010..21390
DNA (381bp) protein (127aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG79_PELHB
Branched-chain amino acid transport system permeas e protein LivM {ECO:0000313|EMBL:CDP53787.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; D
branched-chain amino acid transport system permease protein LivM
SCNpilot_cont_300_bf_scaffold_1745_25
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21397..22038)
DNA (642bp) protein (214aa)
glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAK5_9BRAD
Glutathione S-transferase {ECO:0000313|EMBL:ERF81793.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
SCNpilot_cont_300_bf_scaffold_1745_26
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..23390)
DNA (1212bp) protein (404aa)
Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG76_PELHB
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB78298.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sour
branched-chain amino acid ABC transporter, amino acid-binding protein
SCNpilot_cont_300_bf_scaffold_1745_27
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23618..24688
DNA (1071bp) protein (357aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG75_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53784.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
substrate-binding region of ABC-type glycine betaine transport system
SCNpilot_cont_300_bf_scaffold_1745_28
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24798..25217
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG73_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11010.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1745_29
unknown

Not on your lists

comp(25550..25729)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1745_30
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25744..27474
DNA (1731bp) protein (577aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Pyruvate carboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG72_PELHB
pyruvate carboxyl transferase
Displaying 30 items

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