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SCNpilot_cont_300_bf_scaffold_1874

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1874_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..489
DNA (489bp) protein (163aa)
ABC transporter periplasmic solute-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NUH4_9RHIZ
ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:EKF43010.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor
amino acid ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1874_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

586..2109
DNA (1524bp) protein (508aa)
urea ABC transporter permease n=1 Tax=Rhizobium phaseoli RepID=UPI00030A549F
Urea ABC transporter permease {ECO:0000313|EMBL:KKB85026.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 1
urea or short-chain amide ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1874_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2106..3275
DNA (1170bp) protein (390aa)
Urea ABC transporter, permease protein UrtC n=1 Tax=Nitratireductor indicus C115 RepID=K2PPL2_9RHIZ rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB84951.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi
urea or short-chain amide ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1874_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3278..4036
DNA (759bp) protein (253aa)
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KJR5_RHILT
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB84952.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
urea ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1874_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4033..4326
DNA (294bp) protein (98aa)
Urea ABC transporter ATPase protein UrtE n=1 Tax=Nitratireductor indicus C115 RepID=K2NYS2_9RHIZ
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC34910.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
urtE; Urea ABC transporter, ATP-binding protein UrtE
SCNpilot_cont_300_bf_scaffold_1874_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4332..4655
DNA (324bp) protein (108aa)
Urea ABC transporter ATPase protein UrtE n=1 Tax=Nitratireductor indicus C115 RepID=K2NYS2_9RHIZ
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB80021.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
urea ABC transporter ATPase protein UrtE
SCNpilot_cont_300_bf_scaffold_1874_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4663..5979)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIM6_NEPCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
conserved protein of unknown function
SCNpilot_cont_300_bf_scaffold_1874_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6015..9329)
DNA (3315bp) protein (1105aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3G7_9RHIZ
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:AGK57503.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyph
SCNpilot_cont_300_bf_scaffold_1874_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9630..10451
DNA (822bp) protein (274aa)
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MS6_RHOP5
dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein {ECO:0000313|EMBL:ABJ06758.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
SCNpilot_cont_300_bf_scaffold_1874_10
unknown

Not on your lists

comp(10448..11056)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1874_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11293..12336
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYC2_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64905.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
SCNpilot_cont_300_bf_scaffold_1874_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12355..13491)
DNA (1137bp) protein (379aa)
UPI0003CFB9CC related cluster n=1 Tax=unknown RepID=UPI0003CFB9CC
Putative integral membrane protein {ECO:0000313|EMBL:KFC69747.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. L
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1874_13
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13488..14303)
DNA (816bp) protein (272aa)
Glycosyl transferase group 1 protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BV56_9RHIZ
Glycosyl transferase group 1 protein {ECO:0000313|EMBL:EIM73458.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Ni
glycosyl transferase family 1
SCNpilot_cont_300_bf_scaffold_1874_14
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14923..15480
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002DEB2DC
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:CDF86807.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmus
SCNpilot_cont_300_bf_scaffold_1874_15

Not on your lists

comp(15484..16230)
DNA (747bp) protein (249aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YAG6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34351.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_1874_16
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16645..16866
DNA (222bp) protein (74aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocycl
dTDP-glucose 4,6-dehydratase n=1 Tax=Thauera sp. 27 RepID=N6YIX2_9RHOO
dTDP-glucose 4,6-dehydratase
SCNpilot_cont_300_bf_scaffold_1874_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16863..17789
DNA (927bp) protein (309aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSY0_9BURK
glucose-1-phosphate thymidylyltransferase
SCNpilot_cont_300_bf_scaffold_1874_18
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17942..19504
DNA (1563bp) protein (521aa)
Glycosyl transferase, group 2 family protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FX38_STIAD rbh
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIO46894.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholder
SCNpilot_cont_300_bf_scaffold_1874_19
unknown

Not on your lists

19470..20117
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1874_20
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20060..20845)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HVZ3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB17257.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1874_21
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..21816)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037A07A0
Family 2 glycosyl transferase {ECO:0000313|EMBL:KCZ87584.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jo
glycosyltransferase
SCNpilot_cont_300_bf_scaffold_1874_22
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21813..22559)
DNA (747bp) protein (249aa)
ABC transporter related protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WCT6_BURSC
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG14715.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
SCNpilot_cont_300_bf_scaffold_1874_23
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22565..23443)
DNA (879bp) protein (293aa)
Putative ATP-transporter permease n=1 Tax=Azospirillum brasilense RepID=Q6QW95_AZOBR
Putative ATP-transporter permease {ECO:0000313|EMBL:AAS83021.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiri
sugar ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1874_24
unknown

Not on your lists

23756..24001
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1874_25
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24102..25571
DNA (1470bp) protein (490aa)
Serotype-specific glucosyl transferase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WFE6_PANSA
serotype-specific glucosyl transferase
Serotype-specific glucosyl transferase {ECO:0000313|EMBL:ADU69860.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pan
SCNpilot_cont_300_bf_scaffold_1874_26
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25568..26461
DNA (894bp) protein (298aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_16_Betaproteobacteria_56_24_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudomonas syringae pv. syringae B64 RepID=L8NKZ7_PSESY
SCNpilot_cont_300_bf_scaffold_1874_27
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26480..27205)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMP9_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS51332.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing
SCNpilot_cont_300_bf_scaffold_1874_28
unknown

Not on your lists

comp(27220..27885)
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1874_29
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27950..28450)
DNA (501bp) protein (167aa)
curlin n=1 Tax=Pseudomonas monteilii RepID=UPI0002EFD6FB
Uncharacterized protein {ECO:0000313|EMBL:ETX26583.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isopora
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1874_30
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28566..29639)
DNA (1074bp) protein (358aa)
Putative Curli production assembly/transport component n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMP1_MOBAS rbh
Putative Curli production assembly/transport component {ECO:0000313|EMBL:EAS51340.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.
csgG; curli production assembly/transport component CsgG
Displaying items 1-30 of 34 in total

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