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SCNpilot_cont_300_bf_scaffold_1910

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1910_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..924)
DNA (924bp) protein (308aa)
Sugar ABC transporter, substrate-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU03_9RHIZ
ABC transport system, sugar-binding protein {ECO:0000313|EMBL:CDP53528.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
ugpB; glycerol-3-phosphate-binding periplasmic protein
SCNpilot_cont_300_bf_scaffold_1910_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1183..1959)
DNA (777bp) protein (259aa)
UPI0003CE4C7A related cluster n=1 Tax=unknown RepID=UPI0003CE4C7A
Exodeoxyribonuclease III {ECO:0000313|EMBL:ESY72005.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
exodeoxyribonuclease III Xth
SCNpilot_cont_300_bf_scaffold_1910_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..2668)
DNA (642bp) protein (214aa)
Putative hydrolase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM61_RHISN
Alpha/beta hydrolase {ECO:0000313|EMBL:KKB10970.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hydrolase
SCNpilot_cont_300_bf_scaffold_1910_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2668..3744)
DNA (1077bp) protein (359aa)
O-linked GlcNAc transferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKY6_9RHIZ rbh
O-linked GlcNAc transferase {ECO:0000313|EMBL:EHH03231.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
hypothetical protein,contains Tetratricopeptide repeat regions
SCNpilot_cont_300_bf_scaffold_1910_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..4659)
DNA (906bp) protein (302aa)
Probable DNA repair protein Mesau_03045 n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KMV4_MESAW
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
Ku protein
SCNpilot_cont_300_bf_scaffold_1910_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4784..5650)
DNA (867bp) protein (289aa)
Probable ATP-dependent DNA ligase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM58_RHISN
ATP-dependent DNA ligase
Probable ATP-dependent DNA ligase {ECO:0000313|EMBL:ACP23494.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium
SCNpilot_cont_300_bf_scaffold_1910_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5647..7209)
DNA (1563bp) protein (521aa)
hypothetical protein (EC:6.5.1.1)
ATP-dependent DNA ligase {ECO:0000313|EMBL:CCE99650.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CCE99650.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sino
Plasmid pSfHH103e complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF18_RHIFH
SCNpilot_cont_300_bf_scaffold_1910_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7280..8332)
DNA (1053bp) protein (351aa)
High-affinity nickel transport protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ22_RHITR
hoxN; high-affinity nickel transport protein
High-affinity nickel transport protein {ECO:0000313|EMBL:AGB71242.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_1910_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8401..9501)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003766A47
Uncharacterized protein {ECO:0000313|EMBL:KKB80340.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
3-carboxymuconate cyclase
SCNpilot_cont_300_bf_scaffold_1910_10
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9553..9972
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QKV1_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01765.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas su
SCNpilot_cont_300_bf_scaffold_1910_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10041..10907
DNA (867bp) protein (289aa)
oxidoreductase n=1 Tax=Kaistia granuli RepID=UPI00035E657C
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EIM25434.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; M
6-phosphogluconate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1910_12
unknown

Not on your lists

comp(11040..11771)
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1910_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11916..12905
DNA (990bp) protein (330aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Z4_9RHIZ
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:EHH13229.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
serine protease
SCNpilot_cont_300_bf_scaffold_1910_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13039..14094
DNA (1056bp) protein (352aa)
Glutamyl endopeptidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Z3_9RHIZ
Glutamyl endopeptidase {ECO:0000313|EMBL:EHH13228.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amor
peptidase S1 and S6 chymotrypsin/Hap
SCNpilot_cont_300_bf_scaffold_1910_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14293..16572)
DNA (2280bp) protein (760aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Y7_9RHIZ rbh
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:EHH13222.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
peptidase C14 caspase catalytic subunit p20
SCNpilot_cont_300_bf_scaffold_1910_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16742..18109
DNA (1368bp) protein (456aa)
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:KKB77289.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KKB77289.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
noeJ; Mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037E9B91
SCNpilot_cont_300_bf_scaffold_1910_17
unknown

Not on your lists

comp(18175..18273)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1910_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18677..19303
DNA (627bp) protein (209aa)
N-formylglutamate amidohydrolase superfamily n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J130_POLGS
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KFC61259.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5
N-formylglutamate amidohydrolase superfamily protein
SCNpilot_cont_300_bf_scaffold_1910_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19331..20692
DNA (1362bp) protein (454aa)
Putative glutamate--ammonia ligase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AFX2_PSERE
Glutamine synthetase {ECO:0000313|EMBL:KFL32112.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative glutamate--ammonia ligase
SCNpilot_cont_300_bf_scaffold_1910_20
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20741..21190
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZZE7_9PROT
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHI47832.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
SCNpilot_cont_300_bf_scaffold_1910_21
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21180..21608
DNA (429bp) protein (143aa)
PilT protein-like n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMF3_9RHIZ
Twitching motility protein PilT {ECO:0000313|EMBL:KFL27166.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2
twitching motility protein PilT
SCNpilot_cont_300_bf_scaffold_1910_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21605..22987
DNA (1383bp) protein (461aa)
Dehydrogenase, (Succinatesemialdehyde dehydrogenase, aldehyde dehydrogenase, aldehyde dehydrogenase) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HND3_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:KKB13089.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_1910_23
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23108..23587
DNA (480bp) protein (160aa)
Alcohol dehydrogenase, iron-containing n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DZ59_9RHOB
Alcohol dehydrogenase {ECO:0000313|EMBL:KKB82244.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
dehydrogenase
SCNpilot_cont_300_bf_scaffold_1910_24
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23584..24240
DNA (657bp) protein (219aa)
UPI0003CF146B related cluster n=1 Tax=unknown RepID=UPI0003CF146B
Alcohol dehydrogenase {ECO:0000313|EMBL:KKC38331.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudini
iron-containing alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_1910_25
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25217..25927)
DNA (711bp) protein (237aa)
Two-component cell cycle transcriptional regulator ctrA, winged helix family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R944_PELHB
Cell cycle transcriptional regulator CtrA {ECO:0000313|EMBL:CDP53067.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
two-component cell cycle transcriptional regulator ctrA, winged helix family
SCNpilot_cont_300_bf_scaffold_1910_26
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26375..27598
DNA (1224bp) protein (408aa)
Flagellum-specific ATP synthase FliI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R945_PELHB
ATP synthase {ECO:0000313|EMBL:KFL28901.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
flagellum-specific ATP synthase FliI
SCNpilot_cont_300_bf_scaffold_1910_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27643..28053
DNA (411bp) protein (137aa)
Flagellar protein FliJ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R946_PELHB
Flagellar export protein FliJ {ECO:0000313|EMBL:KKB86427.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 1
flagellar protein FliJ
SCNpilot_cont_300_bf_scaffold_1910_28
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28105..28536)
DNA (432bp) protein (144aa)
acetyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003670C3E
Acetyltransferase {ECO:0000313|EMBL:KKB12589.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_1910_29
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28640..29338)
DNA (699bp) protein (233aa)
Mll3685 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FN8_RHILO
PRC-barrel domain protein {ECO:0000313|EMBL:KFC62424.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1910_30
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29485..30858
DNA (1374bp) protein (458aa)
L-serine dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R948_PELHB rbh
L-serine dehydratase
L-serine dehydratase {ECO:0000313|EMBL:AEQ52428.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium hal
Displaying items 1-30 of 50 in total

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