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SCNpilot_cont_300_bf_scaffold_9566

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_9566_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..466)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A941A
Galactarate dehydratase {ECO:0000313|EMBL:KFL29137.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
galactarate dehydratase
SCNpilot_cont_300_bf_scaffold_9566_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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533..1276
DNA (744bp) protein (248aa)
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCW6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11806.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_9566_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1286..1723
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003660126
Fucose operon fucU protein {ECO:0000313|EMBL:CDP51012.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
fucose binding protein
SCNpilot_cont_300_bf_scaffold_9566_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1798..2646
DNA (849bp) protein (283aa)
2,4-diketo-3-deoxy-L-fuconate hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAQ2_PELHB
2,4-diketo-3-deoxy-L-fuconate hydrolase
2,4-diketo-3-deoxy-L-fuconate hydrolase {ECO:0000313|EMBL:AEQ52575.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="
SCNpilot_cont_300_bf_scaffold_9566_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2698..3339)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9U9_9RHIZ
Transmembrane regulator protein PrtR {ECO:0000313|EMBL:CDP50998.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
putative transmembrane anti-sigma factor
SCNpilot_cont_300_bf_scaffold_9566_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3470..3982)
DNA (513bp) protein (171aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7E6_9RHIZ
RNA polymerase sigma factor {ECO:0000313|EMBL:KFL25358.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_cont_300_bf_scaffold_9566_7
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4002..4400)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PIJ4_9RHIZ
Lipoprotein {ECO:0000313|EMBL:KFL25359.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9566_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4552..5658
DNA (1107bp) protein (369aa)
TRAP mannitol/C4-dicarboxylate transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCE4_AGRRK
TRAP mannitol/C4-dicarboxylate transporter
TRAP mannitol/C4-dicarboxylate transporter {ECO:0000313|EMBL:ACM26065.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_9566_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5624..6601)
DNA (978bp) protein (326aa)
Sialic acid TRAP transporter permease protein siaT N-acetylneuraminic acid permease Neu5Ac permease N-acetylneuraminic acid transporter n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7H0_RHIFH
Sialic acid TRAP transporter permease protein siaT N-acetylneuraminic acid permease; Neu5Ac permease; N-acetylneuraminic acid transporter
Sialic acid TRAP transporter permease protein siaT N-acetylneuraminic acid permease Neu5Ac permease N-acetylneuraminic acid transporter {ECO:0000313|EMBL:CCE96200.1}; TaxID=1117943 species="Bacteria;
Displaying 9 items

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