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SCNpilot_cont_300_bf_scaffold_2059

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2059_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..402
DNA (402bp) protein (134aa)
Putative monovalent cation/H+ antiporter subunit E n=2 Tax=Agrobacterium RepID=F0L5Y9_AGRSH
phaE; monovalent cation/H+ antiporter subunit E
Na(+) H(+) antiporter subunit E {ECO:0000313|EMBL:AHK00365.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
SCNpilot_cont_300_bf_scaffold_2059_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

399..680
DNA (282bp) protein (94aa)
cation:proton antiporter n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039E9F4A
Multisubunit Na+/H+ antiporter, MnhF subunit {ECO:0000313|EMBL:EIM24623.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source=
putative monovalent cation/H+ antiporter subunit F
SCNpilot_cont_300_bf_scaffold_2059_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

677..1066
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368B7C8
Monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:KJR61771.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sourc
phaG; pH adaptation potassium efflux system protein G
SCNpilot_cont_300_bf_scaffold_2059_4
unknown

Not on your lists

comp(1111..1836)
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_5
unknown

Not on your lists

comp(1850..2509)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_6
unknown

Not on your lists

comp(2521..2979)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3591..4724)
DNA (1134bp) protein (378aa)
Two-component response regulator protein (NodW mutant supressor protein) n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JMB4_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:GAJ96594.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
nwsB; two-component response regulator protein (nodW mutant supressor protein)
SCNpilot_cont_300_bf_scaffold_2059_8
unknown

Not on your lists

comp(4832..5176)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5439..6230)
DNA (792bp) protein (264aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CDP53106.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CDP53106.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhizobium sp. CF080 RepID=J3CTK8_9RHIZ rbh
Putative methyl-transferase, S-Adenosyl-L-methionine (SAM)-MTase protein
SCNpilot_cont_300_bf_scaffold_2059_10
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6346..7479
DNA (1134bp) protein (378aa)
Periplasmic binding protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AG56_RHIET rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL25540.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
periplasmic binding protein
SCNpilot_cont_300_bf_scaffold_2059_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7483..8514
DNA (1032bp) protein (344aa)
iron-siderophore ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI000370CB4C rbh
Iron(III) dicitrate transport system permease prot ein FecD {ECO:0000313|EMBL:CDP53108.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
iron-siderophore ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_2059_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8508..9290
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W370_RHILT rbh
Ferrichrome ABC transporter {ECO:0000313|EMBL:KFL25542.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8
iron-siderophore ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2059_13
unknown

Not on your lists

9360..9707
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9934..12564
DNA (2631bp) protein (877aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAD9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR23141.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2059_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12554..14116)
DNA (1563bp) protein (521aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
Putative N-acetylmannosamine-6-phosphate epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQP2_9RHIZ rbh
putative N-acetylmannosamine-6-phosphate 2-epimerase domain protein
SCNpilot_cont_300_bf_scaffold_2059_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14113..15084)
DNA (972bp) protein (324aa)
Dipeptide transporter ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWA6_9RHIZ rbh
Dipeptide transporter ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCV08537.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mes
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2059_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15088..16095)
DNA (1008bp) protein (336aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQQ0_9RHIZ rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB86509.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein
SCNpilot_cont_300_bf_scaffold_2059_18
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16095..17012)
DNA (918bp) protein (306aa)
UPI0003CDD9CF related cluster n=1 Tax=unknown RepID=UPI0003CDD9CF rbh
Putative lysine biosynthesis protein
Putative lysine biosynthesis protein {ECO:0000313|EMBL:CDN58117.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizo
SCNpilot_cont_300_bf_scaffold_2059_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17025..17912)
DNA (888bp) protein (296aa)
UPI0003CDF17A related cluster n=1 Tax=unknown RepID=UPI0003CDF17A rbh
Permease {ECO:0000313|EMBL:ESW82061.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Oligopeptide ABC transport system permease component
SCNpilot_cont_300_bf_scaffold_2059_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17909..18871)
DNA (963bp) protein (321aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQP7_9RHIZ rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIM26289.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
appB; Oligopeptide transport system permease protein AppB
SCNpilot_cont_300_bf_scaffold_2059_21
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18944..20356)
DNA (1413bp) protein (471aa)
UPI0003CE96B3 related cluster n=1 Tax=unknown RepID=UPI0003CE96B3 rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW82063.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
Oligopeptide ABC transporter
SCNpilot_cont_300_bf_scaffold_2059_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20504..21250)
DNA (747bp) protein (249aa)
UPI0003CF9327 related cluster n=1 Tax=unknown RepID=UPI0003CF9327 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESW82064.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
Transcriptional regulator, GntR family
SCNpilot_cont_300_bf_scaffold_2059_23
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21416..22339
DNA (924bp) protein (308aa)
UPI0003CE2377 related cluster n=1 Tax=unknown RepID=UPI0003CE2377 rbh
Oxidoreductase {ECO:0000313|EMBL:ESW82065.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B
Oxidoreductase, putative
SCNpilot_cont_300_bf_scaffold_2059_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22336..23325
DNA (990bp) protein (330aa)
1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase (EC:1.-.-.-)
Putative dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQP3_9RHIZ rbh
Putative dehydrogenase {ECO:0000313|EMBL:EIM26285.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidi
SCNpilot_cont_300_bf_scaffold_2059_25
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23349..24488)
DNA (1140bp) protein (380aa)
Two-component response regulator protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GG12_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:KJC54712.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
two-component response regulator protein
SCNpilot_cont_300_bf_scaffold_2059_26
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..25038)
DNA (378bp) protein (126aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEG6_MESCW
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ADV14581.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_2059_27
unknown

Not on your lists

25239..25928
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_28
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26359..27060
DNA (702bp) protein (234aa)
Early nodulin 75 protein n=1 Tax=Zea mays RepID=B6SU79_MAIZE
Uncharacterised protein {ECO:0000313|EMBL:CRF28956.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="M
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2059_29
unknown

Not on your lists

27654..28571
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2059_30
unknown

Not on your lists

28650..29627
DNA (978bp) protein (326aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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