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SCNpilot_cont_300_bf_scaffold_2106

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2106_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..140)
DNA (138bp) protein (46aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369FDC6
phospho-2-dehydro-3-deoxyheptonate aldolase
SCNpilot_cont_300_bf_scaffold_2106_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(348..806)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZH22_METPB
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDP50079.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2106_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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879..2567
DNA (1689bp) protein (563aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7I5_LEIAQ
MFS transporter {ECO:0000313|EMBL:KFL28171.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_2106_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2744..4621)
DNA (1878bp) protein (626aa)
UvrABC system protein C n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R677_PELHB rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
SCNpilot_cont_300_bf_scaffold_2106_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4618..5406)
DNA (789bp) protein (263aa)
FolM Alternative dihydrofolate reductase 1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R676_PELHB
FolM Alternative dihydrofolate reductase 1 {ECO:0000313|EMBL:CDP50187.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
FolM Alternative dihydrofolate reductase 1
SCNpilot_cont_300_bf_scaffold_2106_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5561..5845
DNA (285bp) protein (95aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R675_PELHB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEQ52168.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacteriu
SCNpilot_cont_300_bf_scaffold_2106_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5909..6832
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMM6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKC32272.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2106_8
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6783..7013)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R674_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ52167.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
SCNpilot_cont_300_bf_scaffold_2106_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7101..7541
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP50182.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_cont_300_bf_scaffold_2106_10
unknown

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comp(7643..7867)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2106_11
unknown

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comp(7976..8323)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2106_12
unknown

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comp(8488..8823)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2106_13
unknown

Not on your lists

8955..9266
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2106_14
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10491..11321
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RC53_KANKD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV26845.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensi
Displaying 14 items

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