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SCNpilot_cont_300_bf_scaffold_2124

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2124_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T881_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KKB85241.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2124_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

350..1321
DNA (972bp) protein (324aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPN9_9BACT
Protein {ECO:0000313|EMBL:CDP51792.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
rmlD substrate binding domain protein
SCNpilot_cont_300_bf_scaffold_2124_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1338..2156)
DNA (819bp) protein (273aa)
Glutamyl-Q-tRNA synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI5_PELHB
Glutamyl-Q-tRNA synthetase {ECO:0000313|EMBL:KFC65399.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
glutamyl-Q-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_2124_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2170..2826
DNA (657bp) protein (219aa)
alkA; DNA-3-methyladenine glycosidase II (EC:3.2.2.21)
DNA-3-methyladenine glycosidase II n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9J6_BORPD
DNA-3-methyladenine glycosidase {ECO:0000313|EMBL:KKB11117.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis
SCNpilot_cont_300_bf_scaffold_2124_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2823..3479
DNA (657bp) protein (219aa)
Esterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86119.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
phospholipase/carboxylesterase family protein
SCNpilot_cont_300_bf_scaffold_2124_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3574..4131
DNA (558bp) protein (186aa)
HNH endonuclease family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI8_PELHB
MFS transporter {ECO:0000313|EMBL:KKB78343.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
HNH endonuclease family protein
SCNpilot_cont_300_bf_scaffold_2124_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4201..4461
DNA (261bp) protein (87aa)
addiction module antitoxin n=1 Tax=Rhizobium loti RepID=UPI00037112FC
Addiction module antitoxin {ECO:0000313|EMBL:KKB11120.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
addiction module antitoxin
SCNpilot_cont_300_bf_scaffold_2124_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4461..4832
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00037D8F6F
Plasmid stabilization protein {ECO:0000313|EMBL:KDR91102.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
plasmid stabilization system
SCNpilot_cont_300_bf_scaffold_2124_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4730..5158)
DNA (429bp) protein (143aa)
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI9_PELHB
Periplasmic thiol:disulfide oxidoreductase DsbB, r equired for DsbA reoxidation {ECO:0000313|EMBL:CDP51786.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphom
periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
SCNpilot_cont_300_bf_scaffold_2124_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5293..6075)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827474
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE45461.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_cont_300_bf_scaffold_2124_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6142..7047)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAU4_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH90961.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain
SCNpilot_cont_300_bf_scaffold_2124_12
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7727..9238
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TI06_9BRAD rbh
Blr1988 protein
Blr1988 protein {ECO:0000313|EMBL:CDN50072.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizo
SCNpilot_cont_300_bf_scaffold_2124_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9231..9902
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TI07_9BRAD
Blr1989 protein
Blr1989 protein {ECO:0000313|EMBL:CDN50071.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizo
SCNpilot_cont_300_bf_scaffold_2124_14
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9899..13366
DNA (3468bp) protein (1156aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036CE418 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE06096.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2124_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13347..14504
DNA (1158bp) protein (386aa)
Uncharacterized protein n=3 Tax=Bradyrhizobium RepID=G7DCZ7_BRAJP rbh
Blr1991 protein
Blr1991 protein {ECO:0000313|EMBL:CDN50069.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizo
SCNpilot_cont_300_bf_scaffold_2124_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14558..15247)
DNA (690bp) protein (230aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0K555_RHILT
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EJC72319.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
hypothetical protein
Displaying 16 items

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