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SCNpilot_cont_300_bf_scaffold_2907

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2907_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2141)
DNA (2139bp) protein (713aa)
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KFL27741.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KFL27741.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiac
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B3_PELHB
2-oxoglutarate dehydrogenase E1
SCNpilot_cont_300_bf_scaffold_2907_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2311..3216)
DNA (906bp) protein (302aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rhizobium sp. CF122 RepID=J3BL47_9RHIZ
succinate--CoA ligase
SCNpilot_cont_300_bf_scaffold_2907_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..3649)
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DR3_RHOPS
PilT protein-like protein
SCNpilot_cont_300_bf_scaffold_2907_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3639..3836)
DNA (198bp) protein (66aa)
CopG-like DNA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DR4_RHOPS
CopG-like DNA-binding
CopG-like DNA-binding {ECO:0000313|EMBL:ABE37775.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
SCNpilot_cont_300_bf_scaffold_2907_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3894..4463)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP52312.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_cont_300_bf_scaffold_2907_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4500..5699)
DNA (1200bp) protein (400aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase (ADP-forming) subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Rhizobium mongolense RepID=UPI0003B4C88F
SCNpilot_cont_300_bf_scaffold_2907_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5709..6671)
DNA (963bp) protein (321aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1228055 species="Bacteria; P
Malate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B6_PELHB
malate dehydrogenase
SCNpilot_cont_300_bf_scaffold_2907_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6766..7803)
DNA (1038bp) protein (346aa)
ATPase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B7_PELHB
ATPase {ECO:0000313|EMBL:CDP52309.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ATPase
SCNpilot_cont_300_bf_scaffold_2907_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8108..8689)
DNA (582bp) protein (194aa)
Outer membrane lipoprotein omp19 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B8_PELHB
Outer membrane lipoprotein omp19 {ECO:0000313|EMBL:CDP52308.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB
outer membrane lipoprotein omp19
SCNpilot_cont_300_bf_scaffold_2907_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8823..9044)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6C1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP52307.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2907_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9047..9826)
DNA (780bp) protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6C2_PELHB
succinate dehydrogenase iron-sulfur protein
SCNpilot_cont_300_bf_scaffold_2907_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..10098)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI000308B70D
Uncharacterized protein {ECO:0000313|EMBL:KKC33181.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2907_13
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10111..10806)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FAD14
Uncharacterized protein {ECO:0000313|EMBL:KFL27749.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2907_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10803..11120)
DNA (318bp) protein (106aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QMK5_METTR
PilT protein domain protein
SCNpilot_cont_300_bf_scaffold_2907_15
unknown

Not on your lists

comp(11200..11463)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2907_16
unknown

Not on your lists

comp(11493..11804)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2907_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11872..12255)
DNA (384bp) protein (128aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Brucella melitensis F1/06 B10 RepID=N8CAC5_BRUML
sdhA; succinate dehydrogenase, flavoprotein subunit
SCNpilot_cont_300_bf_scaffold_2907_18
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12272..13702
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A307F
hypothetical protein Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2907_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13588..13971)
DNA (384bp) protein (128aa)
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6C4_PELHB
Succinate dehydrogenase hydrophobic membrane ancho r protein {ECO:0000313|EMBL:CDP52302.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
succinate dehydrogenase hydrophobic membrane anchor protein
SCNpilot_cont_300_bf_scaffold_2907_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13968..14354)
DNA (387bp) protein (129aa)
Succinate dehydrogenase cytochrome b-556 subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6C5_PELHB
Succinate dehydrogenase {ECO:0000313|EMBL:KFL27752.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
succinate dehydrogenase cytochrome b-556 subunit
SCNpilot_cont_300_bf_scaffold_2907_21
unknown

Not on your lists

comp(14458..14679)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2907_22
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14806..15381
DNA (576bp) protein (192aa)
NTP pyrophosphohydrolase n=1 Tax=Acidovorax sp. CF316 RepID=J0TWN2_9BURK
Nudix hydrolase family protein YffH {ECO:0000313|EMBL:CDP52299.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
protein containing C-terminal region of TrgB protein
SCNpilot_cont_300_bf_scaffold_2907_23
unknown

Not on your lists

comp(15378..15611)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2907_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15733..15942)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07730.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2907_25
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16011..16697
DNA (687bp) protein (229aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase n=1 Tax=Rhizobium sp. CF142 RepID=J1SKF4_9RHIZ
SCNpilot_cont_300_bf_scaffold_2907_26
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16684..17070)
DNA (387bp) protein (129aa)
Membrane protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QQD3_RALPI
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CDP52294.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devos
membrane protein
SCNpilot_cont_300_bf_scaffold_2907_27
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17064..17504)
DNA (441bp) protein (147aa)
Membrane protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AA12_9NEIS
Acetylserine transporter {ECO:0000313|EMBL:KKC35169.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirud
eamA; cysteine and o-acetyl-l-serine efflux system, duf6
SCNpilot_cont_300_bf_scaffold_2907_28
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17528..18568)
DNA (1041bp) protein (347aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E2_PELHB
aspartate-semialdehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_2907_29
unknown

Not on your lists

comp(18667..18777)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2907_30
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18965..20143
DNA (1179bp) protein (393aa)
HI0933 family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM0_CAUST
Membrane protein {ECO:0000313|EMBL:KKB06854.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy