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SCNpilot_cont_300_bf_scaffold_2008

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2008_1
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(106..732)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL1_FLAB3 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KIA84514.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chr
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2008_2
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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783..1460
DNA (678bp) protein (226aa)
TatD-related deoxyribonuclease n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL2_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89285.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
TatD-related deoxyribonuclease
SCNpilot_cont_300_bf_scaffold_2008_3
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1457..2191
DNA (735bp) protein (245aa)
HesA/MoeB/ThiF family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL3_FLAB3 rbh
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KIA89286.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryse
HesA/MoeB/ThiF family protein rbh
SCNpilot_cont_300_bf_scaffold_2008_4
unknown

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comp(2060..2482)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2008_5
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2752..3279
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL6_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18157.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2008_6
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3379..5178)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL19_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL73691.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2008_7
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5180..5749)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89290.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2008_8
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5751..7034)
DNA (1284bp) protein (428aa)
Transcriptional regulator n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM0_FLAB3 rbh
ATPase AAA {ECO:0000313|EMBL:KFC24023.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_2008_9
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7449..8885)
DNA (1437bp) protein (479aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXA0_9FLAO
tRNA-i(6)a37 thiotransferase enzyme
SCNpilot_cont_300_bf_scaffold_2008_10
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9003..9728)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM3_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC23483.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas la
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2008_11
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9745..10134)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY18163.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
uncharacterized protein
SCNpilot_cont_300_bf_scaffold_2008_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10168..10659)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=L7TV93_RIEAN
Uncharacterized protein {ECO:0000313|EMBL:KEY18164.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2008_13
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10749..11948)
DNA (1200bp) protein (400aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZM6_FLAB3
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
SCNpilot_cont_300_bf_scaffold_2008_14
unknown

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comp(12083..12154)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 14 items

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