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SCNpilot_cont_300_bf_scaffold_3091

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3091_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1239)
DNA (1239bp) protein (413aa)
Peptidase M23B n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQT3_NITHX
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABE61414.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_3091_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1430..1912)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RLMH_NITHX
rRNA large subunit methyltransferase
SCNpilot_cont_300_bf_scaffold_3091_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2072..2368)
DNA (297bp) protein (99aa)
Ribosomal silencing factor RsfS n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR91_9BRAD
Iojap-related protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_3091_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2616..3230)
DNA (615bp) protein (205aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18) rbh
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR92_9BRAD rbh
SCNpilot_cont_300_bf_scaffold_3091_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3371..4603)
DNA (1233bp) protein (411aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000255|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogena
Gamma-glutamyl phosphate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PROA_NITHX rbh
SCNpilot_cont_300_bf_scaffold_3091_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4718..5440)
DNA (723bp) protein (241aa)
Transcriptional regulator, HxlR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4T3_9BRAD
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EFI52963.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3091_7
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5548..6678
DNA (1131bp) protein (377aa)
acyl-CoA dehydrogenase n=1 Tax=Saccharopolyspora erythraea RepID=UPI0001D30DAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS36646.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_3091_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6998..7432
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQT8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61409.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_3091_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7507..8661)
DNA (1155bp) protein (385aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000255|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000255|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000255|HAMAP-Rule:MF_00456}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00456
Glutamate 5-kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PROB_NITHX
SCNpilot_cont_300_bf_scaffold_3091_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8914..9990)
DNA (1077bp) protein (359aa)
GTPase Obg n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=OBG_NITHX rbh
obgE; GTPase ObgE rbh
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
SCNpilot_cont_300_bf_scaffold_3091_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10120..10722)
DNA (603bp) protein (201aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU1_NITHX
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABE61406.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_3091_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10863..11135)
DNA (273bp) protein (91aa)
50S ribosomal protein L27 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL27_NITHX
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_3091_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11204..11725)
DNA (522bp) protein (174aa)
50S ribosomal protein L21 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR19_AFIFE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplU; 50S ribosomal protein L21
SCNpilot_cont_300_bf_scaffold_3091_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12090..13211
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU4_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61403.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_3091_15
unknown

Not on your lists

14766..14870
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3091_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15494..16108
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU6_NITHX
Uncharacterized protein {ECO:0000313|EMBL:ABE61401.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3091_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16198..16476
DNA (279bp) protein (93aa)
Serine O-acetyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IER2_9BRAD
Membrane protein {ECO:0000313|EMBL:KIZ47686.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
transglycosylase-associated protein
SCNpilot_cont_300_bf_scaffold_3091_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16618..17343
DNA (726bp) protein (242aa)
Nuclease (SNase-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU8_NITHX rbh
nuclease (SNase-like) rbh
Nuclease (SNase-like) {ECO:0000313|EMBL:ABE61399.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitr
SCNpilot_cont_300_bf_scaffold_3091_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17622..18890
DNA (1269bp) protein (423aa)
Peptidase M48, Ste24p n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU9_NITHX
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABE61398.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitr
SCNpilot_cont_300_bf_scaffold_3091_20
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19336..20157)
DNA (822bp) protein (274aa)
Transcriptional regulator, CarD family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVL2_NITWN rbh
transcription factor CarD rbh
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ABA03679.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
SCNpilot_cont_300_bf_scaffold_3091_21
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20555..20893)
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR41_9BRAD
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:EAQ37547.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
4Fe-4S ferredoxin
SCNpilot_cont_300_bf_scaffold_3091_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21360..23339)
DNA (1980bp) protein (660aa)
Helicase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV3_NITHX
helicase-like protein
Helicase-like protein {ECO:0000313|EMBL:ABE61394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensi
Displaying 22 items

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