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SCNpilot_cont_300_bf_scaffold_1161

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1161_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1587
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=323097 species="Bacteria; Proteobac
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP6_NITHX
SCNpilot_cont_300_bf_scaffold_1161_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2065..2583
DNA (519bp) protein (173aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP7_NITHX rbh
ErfK/YbiS/YcfS/YnhG
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABE61100.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
SCNpilot_cont_300_bf_scaffold_1161_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2645..3124)
DNA (480bp) protein (160aa)
Nuclease (SNase-like) n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSK0_9BRAD
Nuclease (SNase-like) {ECO:0000313|EMBL:EAQ37005.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A
nuclease
SCNpilot_cont_300_bf_scaffold_1161_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3298..3522)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61099.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1161_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3730..5040
DNA (1311bp) protein (437aa)
Fmu (Sun) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP9_NITHX
hypothetical protein
Fmu (Sun) {ECO:0000313|EMBL:ABE61098.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X1
SCNpilot_cont_300_bf_scaffold_1161_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..6928
DNA (1755bp) protein (585aa)
Heparinase II/III-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ0_NITHX rbh
Heparinase II/III-like protein {ECO:0000313|EMBL:ABE61097.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ha
heparinase II/III-like rbh
SCNpilot_cont_300_bf_scaffold_1161_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7094..8686
DNA (1593bp) protein (531aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSJ5_9BRAD
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
SCNpilot_cont_300_bf_scaffold_1161_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9009..9647
DNA (639bp) protein (213aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ2_NITHX
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABE61095.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitr
SCNpilot_cont_300_bf_scaffold_1161_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9644..10627
DNA (984bp) protein (328aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ3_NITHX rbh
cytochrome c, class I rbh
Cytochrome c, class I {ECO:0000313|EMBL:ABE61094.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitr
SCNpilot_cont_300_bf_scaffold_1161_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..12030)
DNA (1389bp) protein (463aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ4_NITHX rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE61093.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_1161_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12136..13890
DNA (1755bp) protein (585aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 {ECO:0000313|EMBL:ABE61092.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABE61092.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteob
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ5_NITHX
SCNpilot_cont_300_bf_scaffold_1161_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14029..14595
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61089.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1161_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14843..16192
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ9_NITHX rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABE61088.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambur
SCNpilot_cont_300_bf_scaffold_1161_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16266..17186
DNA (921bp) protein (307aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169) rbh
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
2-dehydropantoate 2-reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR0_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1161_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17197..17889)
DNA (693bp) protein (231aa)
glutathione S-transferase (EC:2.5.1.18) rbh
Glutathione S-transferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSI8_9BRAD rbh
Glutathione S-transferase {ECO:0000313|EMBL:EAQ37015.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-
SCNpilot_cont_300_bf_scaffold_1161_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18081..18887
DNA (807bp) protein (269aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=UPPP_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1161_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18951..19916)
DNA (966bp) protein (322aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR3_NITHX
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABE61084.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_1161_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20226..21743)
DNA (1518bp) protein (506aa)
UPF0061 protein Nham_2958 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y2958_NITHX rbh
hypothetical protein rbh
UPF0061 protein Nham_2958 {ECO:0000255|HAMAP-Rule:MF_00692}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_1161_19
bacterium YEK0313, Bacteria

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comp(22032..22811)
DNA (780bp) protein (260aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QP21_9BRAD
GDP-L-fucose synthase {ECO:0000313|EMBL:CEJ14711.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_1161_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22961..24541)
DNA (1581bp) protein (527aa)
DSBA oxidoreductase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349C1E3 rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KJC50432.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LT
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_300_bf_scaffold_1161_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24557..25762)
DNA (1206bp) protein (402aa)
secretion protein HylD n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A514B rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC53862.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
secretion protein HlyD family protein
SCNpilot_cont_300_bf_scaffold_1161_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25966..26697)
DNA (732bp) protein (244aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132G3_RHOPS rbh
cyclic nucleotide-binding protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABE41026.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source
SCNpilot_cont_300_bf_scaffold_1161_23
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27070..28167)
DNA (1098bp) protein (366aa)
DNA topoisomerase I n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003614051 rbh
Topoisomerase IB {ECO:0000313|EMBL:EHR00311.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471
putative DNA topoisomerase I
SCNpilot_cont_300_bf_scaffold_1161_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28571..29167
DNA (597bp) protein (199aa)
TPR repeat protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWA6_NITWN
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABA03435.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (
SCNpilot_cont_300_bf_scaffold_1161_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29482..29871
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61082.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1161_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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30259..30879
DNA (621bp) protein (207aa)
3'-5' exonuclease n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSH5_9BRAD
3'-5' exonuclease {ECO:0000313|EMBL:EAQ37025.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
3'-5' exonuclease
SCNpilot_cont_300_bf_scaffold_1161_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31242..31985
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61079.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1161_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31982..32665
DNA (684bp) protein (228aa)
OstA-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR9_NITHX rbh
OstA-like protein rbh
OstA-like protein {ECO:0000313|EMBL:ABE61078.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobac
SCNpilot_cont_300_bf_scaffold_1161_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32862..33869
DNA (1008bp) protein (336aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRS0_NITHX rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ABE61077.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
SCNpilot_cont_300_bf_scaffold_1161_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33894..34367)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRS1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61076.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
Displaying items 1-30 of 46 in total

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