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SCNpilot_cont_300_bf_scaffold_1314

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1314_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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320..601
DNA (282bp) protein (94aa)
FecR protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSZ1_NITWN
FecR protein
FecR protein {ECO:0000313|EMBL:ABA04600.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain
SCNpilot_cont_300_bf_scaffold_1314_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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853..1038
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62484.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1314_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1165..1902)
DNA (738bp) protein (246aa)
OmpA-like transmembrane region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR4_NITHX
OmpA-like transmembrane region
OmpA-like transmembrane region {ECO:0000313|EMBL:ABE62483.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sou
SCNpilot_cont_300_bf_scaffold_1314_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2161..2592)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVP5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35944.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1314_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2771..2977)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62481.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1314_6
unknown

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comp(3074..3205)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1314_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3319..4098
DNA (780bp) protein (260aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
NAD(+) kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR7_NITHX
SCNpilot_cont_300_bf_scaffold_1314_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4197..4742
DNA (546bp) protein (182aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR8_NITHX rbh
response regulator receiver domain-containing protein rbh
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABE62479.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;
SCNpilot_cont_300_bf_scaffold_1314_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4754..5332
DNA (579bp) protein (193aa)
Hpt protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVP1_9BRAD
Hpt protein {ECO:0000313|EMBL:EAQ35949.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
CheA signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1314_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5476..5868
DNA (393bp) protein (131aa)
Putative insertion element (IS) transposase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DSS2_9RHOB
Putative insertion element (IS) transposase {ECO:0000313|EMBL:EJW09457.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source
putative insertion element (IS) transposase
SCNpilot_cont_300_bf_scaffold_1314_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5877..6236
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036420A5
Uncharacterized protein {ECO:0000313|EMBL:KJC50914.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
ISBm1, transposase orfB
SCNpilot_cont_300_bf_scaffold_1314_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6492..8042)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS0_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62477.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1314_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8274..9002)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TT5_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04649.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
SCNpilot_cont_300_bf_scaffold_1314_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9056..9625)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62476.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1314_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9586..10002)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62476.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1314_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10301..10741)
DNA (441bp) protein (147aa)
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000255|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000255|HAMAP-Rule:MF_01021};; TaxID=323097 species="Bacteria; Pr
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=HIS3_NITHX
SCNpilot_cont_300_bf_scaffold_1314_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10834..11544)
DNA (711bp) protein (237aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) rbh
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS3_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1314_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11793..12248
DNA (456bp) protein (152aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS4_NITHX
nitrogen-fixing NifU-like
Nitrogen-fixing NifU-like protein {ECO:0000313|EMBL:ABE62473.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_1314_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12279..13058)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62472.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1314_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13428..13799
DNA (372bp) protein (124aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=YIDD_NITHX
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000255|HAMAP-Rule:MF_00386}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacte
SCNpilot_cont_300_bf_scaffold_1314_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13994..15034
DNA (1041bp) protein (347aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDV1_METNO rbh
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACL55673.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" s
SCNpilot_cont_300_bf_scaffold_1314_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15467..16507)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS8_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62469.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1314_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16692..17747
DNA (1056bp) protein (352aa)
Patatin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS9_NITHX rbh
patatin rbh
Patatin {ECO:0000313|EMBL:ABE62468.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14
SCNpilot_cont_300_bf_scaffold_1314_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17760..18188)
DNA (429bp) protein (143aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMT0_NITHX
signal-transduction protein
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ABE62467.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_1314_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18391..19191)
DNA (801bp) protein (267aa)
Rhomboid-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMT1_NITHX rbh
rhomboid-like protein rbh
Rhomboid-like protein {ECO:0000313|EMBL:ABE62466.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensi
SCNpilot_cont_300_bf_scaffold_1314_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19305..19718)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVM7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35961.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1314_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20277..20834
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMT3_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62464.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1314_28
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20992..22056
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G929_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77266.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_1314_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22172..22969
DNA (798bp) protein (266aa)
glutamate racemase (EC:5.1.1.3) rbh
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=323097 species="Bacteria; Prote
Glutamate racemase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMT4_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1314_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23030..23413
DNA (384bp) protein (128aa)
Cupin 2, conserved barrel n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218L9_RHOPB
cupin 2 barrel domain-containing protein
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABD87167.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sou
Displaying items 1-30 of 31 in total

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