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SCNpilot_cont_300_bf_scaffold_1775

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1775_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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267..848
DNA (582bp) protein (194aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTP1_9BRAD
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_cont_300_bf_scaffold_1775_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

876..1688
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHP1_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64256.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1775_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1836..2390
DNA (555bp) protein (185aa)
Probable transcriptional regulatory protein NB311A_15642 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTP3_9BRAD
hypothetical protein
Probable transcriptional regulatory protein Nwi_2729 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter
SCNpilot_cont_300_bf_scaffold_1775_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2387..2542
DNA (156bp) protein (52aa)
Probable transcriptional regulatory protein Nwi_2729 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Y2729_NITWN
hypothetical protein
Probable transcriptional regulatory protein Nwi_2729 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter
SCNpilot_cont_300_bf_scaffold_1775_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3086..4453
DNA (1368bp) protein (456aa)
Magnesium transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHP4_NITHX
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamb
SCNpilot_cont_300_bf_scaffold_1775_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4614..5135
DNA (522bp) protein (174aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; EC=3.1.22.4 {ECO:0000255|HAMAP-Rule:MF_00034};; Holliday junction nuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; Holl
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Nitrobacter hamburgensis RepID=RUVC_NITHX
SCNpilot_cont_300_bf_scaffold_1775_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5132..5749
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHP6_NITHX rbh
ruvA; Holliday junction DNA helicase RuvA
SCNpilot_cont_300_bf_scaffold_1775_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5746..6789
DNA (1044bp) protein (348aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RUVB_NITHX
SCNpilot_cont_300_bf_scaffold_1775_9
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6786..8033)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMI8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23526.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1775_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8089..8538
DNA (450bp) protein (150aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTP8_9BRAD
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:EAQ36708.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
4-hydroxybenzoyl-CoA thioesterase
SCNpilot_cont_300_bf_scaffold_1775_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8684..9157
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTQ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36707.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_cont_300_bf_scaffold_1775_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9465..9833
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTP9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36706.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1775_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9830..11107
DNA (1278bp) protein (426aa)
Probable sigma-70 factor, ECF subfamily protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTQ2_9BRAD rbh
Probable sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:EAQ36705.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1775_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11095..11208)
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:EAQ36704.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
SCNpilot_cont_300_bf_scaffold_1775_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11703..12122
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTQ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36702.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1775_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12173..12592
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64247.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1775_17
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12748..13446
DNA (699bp) protein (233aa)
Transcriptional regulatory protein, TetR family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTQ5_9BRAD
Transcriptional regulatory protein, TetR family protein {ECO:0000313|EMBL:EAQ36701.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1775_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13680..14177
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64245.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1775_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14668..15381
DNA (714bp) protein (238aa)
Cell division and transport-associated protein TolQ n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ3_NITHX
MotA/TolQ/ExbB proton channel
Cell division and transport-associated protein TolQ {ECO:0000313|EMBL:ABE64244.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" s
SCNpilot_cont_300_bf_scaffold_1775_20
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15409..15864
DNA (456bp) protein (152aa)
Cell division and transport-associated protein TolR n=2 Tax=Nitrobacter RepID=Q3SP19_NITWN
biopolymer transport protein ExbD/TolR
Cell division and transport-associated protein TolR {ECO:0000313|EMBL:ABA05972.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" s
SCNpilot_cont_300_bf_scaffold_1775_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15896..16840
DNA (945bp) protein (315aa)
Cell division and transport-associated protein TolA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ5_NITHX
TolA
Cell division and transport-associated protein TolA {ECO:0000313|EMBL:ABE64242.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
SCNpilot_cont_300_bf_scaffold_1775_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16950..18227
DNA (1278bp) protein (426aa)
Protein TolB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=TOLB_NITHX rbh
tolB; translocation protein TolB
Protein TolB {ECO:0000255|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_1775_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18507..20909
DNA (2403bp) protein (801aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ7_NITHX rbh
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABE64240.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
SCNpilot_cont_300_bf_scaffold_1775_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20955..21698
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ8_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64239.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1775_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22052..22549
DNA (498bp) protein (166aa)
OmpA/MotB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHQ9_NITHX
OmpA/MotB
OmpA/MotB {ECO:0000313|EMBL:ABE64238.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamb
SCNpilot_cont_300_bf_scaffold_1775_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22884..23837
DNA (954bp) protein (318aa)
TPR repeat protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHR0_NITHX rbh
TPR repeat-containing protein
TPR repeat protein {ECO:0000313|EMBL:ABE64237.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
SCNpilot_cont_300_bf_scaffold_1775_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24012..25046
DNA (1035bp) protein (345aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHR1_NITHX
tRNA(Ile)-lysidine synthetase-like protein
Displaying 27 items

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