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SCNpilot_cont_300_bf_scaffold_499

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_499_1
unknown

Not on your lists

145..459
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_2
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..2938)
DNA (2136bp) protein (712aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFB7_9SPHN
enolase
SCNpilot_cont_300_bf_scaffold_499_3
unknown

Not on your lists

comp(3200..3877)
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3882..4226)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003656D66
Uncharacterized protein {ECO:0000313|EMBL:KDM67693.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4237..4611)
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=3 Tax=Acidiphilium RepID=A5FV99_ACICJ
crcB; CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sour
SCNpilot_cont_300_bf_scaffold_499_6
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4696..6672)
DNA (1977bp) protein (659aa)
Putative NADH dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4H7_ACIMA
putative NADH dehydrogenase
Putative NADH dehydrogenase {ECO:0000313|EMBL:BAJ80029.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium
SCNpilot_cont_300_bf_scaffold_499_7
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6665..7453)
DNA (789bp) protein (263aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR1_9BURK
NADH ubiquinone oxidoreductase, 20 kDa subunit {ECO:0000313|EMBL:EGD06341.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sou
NADH ubiquinone oxidoreductase, 20 kDa subunit
SCNpilot_cont_300_bf_scaffold_499_8

Not on your lists

comp(7464..8930)
DNA (1467bp) protein (489aa)
NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=mine drainage metagenome RepID=T1AWF6_9ZZZZ rbh
NADH dehydrogenase (Ubiquinone), 30 kDa subunit {ECO:0000313|EMBL:EQD60683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative NADH-ubiquinone oxidoreductase
SCNpilot_cont_300_bf_scaffold_499_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8927..10411)
DNA (1485bp) protein (495aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5) rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ABQ29827.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABQ29827.1};; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospi
NADH dehydrogenase (Quinone) n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FW45_ACICJ rbh
SCNpilot_cont_300_bf_scaffold_499_10
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10414..11094)
DNA (681bp) protein (227aa)
Hydrogenase 4 membrane component (E) n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR4_9BURK rbh
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:EGD06344.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_499_11
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11099..12046)
DNA (948bp) protein (316aa)
Formate hydrogenlyase subunit 4-like protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR5_9BURK rbh
Formate hydrogenlyase subunit 4-like protein {ECO:0000313|EMBL:EGD06345.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_12
Candidatus Pelagibacter ubique, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12265..12594)
DNA (330bp) protein (110aa)
HIT family hydrolase n=1 Tax=Pelagibacter ubique RepID=UPI00035FD23C
apaG; diadenosine tetraphosphate hydrolase
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:AAZ21651.1}; TaxID=335992 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagi
SCNpilot_cont_300_bf_scaffold_499_13
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12761..13045
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4ZI22_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEF98759.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
SCNpilot_cont_300_bf_scaffold_499_14
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13042..13593
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gluconobacter oxydans H24 RepID=K7T9M9_GLUOY
Integral membrane protein {ECO:0000313|EMBL:GAJ27873.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas meth
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14111..14971
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CAU3_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24226.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_cont_300_bf_scaffold_499_16
unknown

Not on your lists

comp(15780..15878)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16172..16354
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNV8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62089.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_499_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16669..17388
DNA (720bp) protein (240aa)
UPI0003CF5922 related cluster n=1 Tax=unknown RepID=UPI0003CF5922 rbh
4-phosphopantetheinyl transferase {ECO:0000313|EMBL:ESY82443.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
4'-phosphopantetheinyl transferase
SCNpilot_cont_300_bf_scaffold_499_19
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17499..18512
DNA (1014bp) protein (338aa)
UPI0003CE9B20 related cluster n=1 Tax=unknown RepID=UPI0003CE9B20 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY64314.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_20
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18552..20573
DNA (2022bp) protein (674aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003664CB8 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY82526.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
ituC; iturin A synthetase C
SCNpilot_cont_300_bf_scaffold_499_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20655..21827
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPU6_9BRAD rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERF84769.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
Acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_499_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22092..22529
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMY6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62411.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_499_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23368..23586
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPD0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61917.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_499_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23809..24540
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TW49_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY49952.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
SCNpilot_cont_300_bf_scaffold_499_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24544..26322
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6H6_BRAJP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09862.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
SCNpilot_cont_300_bf_scaffold_499_26
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26315..27547
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6H7_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09863.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
SCNpilot_cont_300_bf_scaffold_499_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(27560..27832)
DNA (273bp) protein (91aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA36_9BACT
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:EDY16663.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin
caa(3)-type oxidase, subunit IV
SCNpilot_cont_300_bf_scaffold_499_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27832..28473)
DNA (642bp) protein (214aa)
Cytochrome c oxidase subunit III n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWN1_NITHN
Putative cytochrome c oxidase subunit III {ECO:0000313|EMBL:GAO38476.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
cytochrome C oxidase subunit III
SCNpilot_cont_300_bf_scaffold_499_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28466..30073)
DNA (1608bp) protein (536aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000301F116
Putative cytochrome c oxidase subunit I {ECO:0000313|EMBL:GAO38475.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
SCNpilot_cont_300_bf_scaffold_499_30
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30070..31011)
DNA (942bp) protein (314aa)
Cytochrome c oxidase, subunit II n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKM9_TISMK
Putative cytochrome c oxidase subunit II {ECO:0000313|EMBL:GAO38474.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
ctaC; cytochrome c oxidase subunit II
Displaying items 1-30 of 59 in total

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