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SCNpilot_cont_300_bf_scaffold_790

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_790_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..393
DNA (393bp) protein (131aa)
Propionyl-coenzyme A carboxylase alpha polypeptide n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYS8_9BRAD
Propionyl-coenzyme A carboxylase alpha polypeptide {ECO:0000313|EMBL:EAQ34861.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" so
carbamoyl-phosphate synthase subunit L
SCNpilot_cont_300_bf_scaffold_790_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

465..764
DNA (300bp) protein (100aa)
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ha
Acylphosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ACYP_NITHX
acylphosphatase
SCNpilot_cont_300_bf_scaffold_790_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(820..1542)
DNA (723bp) protein (241aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
Octanoyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LIPB_NITHX rbh
lipB; lipoyltransferase
SCNpilot_cont_300_bf_scaffold_790_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1586..1849
DNA (264bp) protein (88aa)
Surface presentation of antigens (SPOA) protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLE0_NITHX
hypothetical protein
Surface presentation of antigens (SPOA) protein {ECO:0000313|EMBL:ABE62957.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sourc
SCNpilot_cont_300_bf_scaffold_790_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2211..3053)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62626.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_790_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3423..3725
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWX3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35519.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_790_7
unknown

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4544..4741
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_790_8
unknown

Not on your lists

4784..4951
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_790_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5248..6555
DNA (1308bp) protein (436aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM
Serine hydroxymethyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLYA_NITHX rbh
SCNpilot_cont_300_bf_scaffold_790_10
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6713..7195
DNA (483bp) protein (161aa)
Transcriptional repressor NrdR n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=NRDR_NITWN
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacte
SCNpilot_cont_300_bf_scaffold_790_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7192..8343
DNA (1152bp) protein (384aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB7_NITHX
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
SCNpilot_cont_300_bf_scaffold_790_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8528..9136
DNA (609bp) protein (203aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB6_NITHX rbh
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABE62631.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacte
SCNpilot_cont_300_bf_scaffold_790_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..9767
DNA (492bp) protein (164aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RISB_NITHX
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase
SCNpilot_cont_300_bf_scaffold_790_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9775..10257
DNA (483bp) protein (161aa)
N utilization substance protein B homolog n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=NUSB_NITHX
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria;
SCNpilot_cont_300_bf_scaffold_790_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10310..11281
DNA (972bp) protein (324aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB3_NITHX rbh
SCNpilot_cont_300_bf_scaffold_790_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11480..14536)
DNA (3057bp) protein (1019aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=323097 species="Bacteria; Proteobacteria; Alp
Ribonuclease E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB1_NITHX rbh
ribonuclease rbh
SCNpilot_cont_300_bf_scaffold_790_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15218..16504
DNA (1287bp) protein (429aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABE62637.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABE62637.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB0_NITHX rbh
SCNpilot_cont_300_bf_scaffold_790_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16689..19085
DNA (2397bp) protein (799aa)
penicillin-binding protein 1A (EC:2.4.1.129)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABE62638.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABE62638.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
Penicillin-binding protein 1A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA9_NITHX
SCNpilot_cont_300_bf_scaffold_790_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20396
DNA (969bp) protein (323aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA8_NITHX
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_790_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21076..22170
DNA (1095bp) protein (365aa)
Type I secretion outer membrane protein, TolC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA7_NITHX
Type I secretion outer membrane protein, TolC
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:ABE62640.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nit
SCNpilot_cont_300_bf_scaffold_790_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22456..23160
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA6_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62641.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_790_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23343..26207
DNA (2865bp) protein (955aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9) rbh
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA5_NITHX rbh
SCNpilot_cont_300_bf_scaffold_790_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26412..27284
DNA (873bp) protein (291aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA4_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE62643.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;
SCNpilot_cont_300_bf_scaffold_790_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27265..27804)
DNA (540bp) protein (180aa)
3-methyladenine DNA glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000255|HAMAP-Rule:MF_00527};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Putative 3-methyladenine DNA glycosylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=3MGH_NITWN
SCNpilot_cont_300_bf_scaffold_790_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27937..28896
DNA (960bp) protein (320aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
Lipoyl synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=LIPA_NITWN rbh
lipoyl synthase rbh
SCNpilot_cont_300_bf_scaffold_790_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28908..29435
DNA (528bp) protein (176aa)
DNA topology modulation protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWR1_9BRAD rbh
DNA topology modulation protein {ECO:0000313|EMBL:EAQ35577.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter s
topology modulation protein
SCNpilot_cont_300_bf_scaffold_790_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29435..29902
DNA (468bp) protein (156aa)
Cyclase/dehydrase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA1_NITHX
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ABE62646.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (s
SCNpilot_cont_300_bf_scaffold_790_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29914..30540)
DNA (627bp) protein (209aa)
CinA-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA0_NITHX rbh
CinA-like protein rbh
CinA-like protein {ECO:0000313|EMBL:ABE62647.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (s
SCNpilot_cont_300_bf_scaffold_790_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30542..31618)
DNA (1077bp) protein (359aa)
Bifunctional enzyme IspD/IspF {ECO:0000255|HAMAP-Rule:MF_01520}; Includes:; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_01520}; EC=2.7.7.60 {ECO:0000255|HAMAP-R
Bifunctional enzyme IspD/IspF n=2 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ISPDF_NITHX
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCNpilot_cont_300_bf_scaffold_790_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32056..33009
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
tRNA-dihydrouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM98_NITHX
dihydrouridine synthase TIM-barrel protein nifR3
Displaying items 1-30 of 76 in total

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