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SCNpilot_cont_300_bf_scaffold_890

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_890_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78..1106
DNA (1029bp) protein (343aa)
Respiratory nitrate reductase chaperone NarJ n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX2_NITHX
nitrate reductase molybdenum cofactor assembly chaperone
Respiratory nitrate reductase chaperone NarJ {ECO:0000313|EMBL:ABE64175.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="
SCNpilot_cont_300_bf_scaffold_890_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1141..1818
DNA (678bp) protein (226aa)
Respiratory nitrate reductase gamma subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX3_NITHX rbh
nitrate reductase subunit gamma rbh
Respiratory nitrate reductase gamma subunit {ECO:0000313|EMBL:ABE64174.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="N
SCNpilot_cont_300_bf_scaffold_890_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2081..3331
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX4_NITHX rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE64173.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_890_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3492..4544
DNA (1053bp) protein (351aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX5_NITHX
C4-dicarboxylate transporter/malic acid transport protein
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ABE64172.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
SCNpilot_cont_300_bf_scaffold_890_5
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5425..6669
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NKN8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89925.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
phage integrase family protein
SCNpilot_cont_300_bf_scaffold_890_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7051..7947
DNA (897bp) protein (299aa)
Peptidase M, neutral zinc metallopeptidase, zinc-binding site n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IUP4_POLGS
peptidase M, neutral zinc metallopeptidase, zinc-binding site
Peptidase M, neutral zinc metallopeptidase, zinc-binding site {ECO:0000313|EMBL:ADZ69098.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gil
SCNpilot_cont_300_bf_scaffold_890_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8919
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIZ2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ11836.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_890_8
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8900..9694
DNA (795bp) protein (265aa)
Phage integrase family protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SR24_XANCT
Phage integrase family protein {ECO:0000313|EMBL:CCP38532.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomona
hypothetical protein
SCNpilot_cont_300_bf_scaffold_890_9
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9776..9988)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPP4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50898.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
SCNpilot_cont_300_bf_scaffold_890_10
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10607..12337
DNA (1731bp) protein (577aa)
Partitioning protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN71_9PROT
Partitioning protein {ECO:0000313|EMBL:EKF06382.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira pr
partitioning protein
SCNpilot_cont_300_bf_scaffold_890_11
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

12725..13279
DNA (555bp) protein (185aa)
hypothetical protein
hypothetical protein id=12555694 bin=CNBR_ACIDO species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein id=12555694 bin=CNBR_ACIDO species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SCNpilot_cont_300_bf_scaffold_890_12
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..14993
DNA (1656bp) protein (552aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A6J5_RHIET rbh
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:EGE59912.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
Relaxase/mobilization nuclease family protein
SCNpilot_cont_300_bf_scaffold_890_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14998..18891)
DNA (3894bp) protein (1298aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ2_METSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACK50906.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
SCNpilot_cont_300_bf_scaffold_890_14
unknown

Not on your lists

comp(18891..19187)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_15
unknown

Not on your lists

comp(19184..19843)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_16
unknown

Not on your lists

comp(19863..20561)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_17
unknown

Not on your lists

comp(20606..20737)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_18
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20728..21141)
DNA (414bp) protein (138aa)
XRE family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TDC7_RHORU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC24192.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source=
SCNpilot_cont_300_bf_scaffold_890_19
unknown

Not on your lists

comp(21705..22226)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22413..22646
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQM0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61477.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_890_21
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22679..22852
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50908.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
SCNpilot_cont_300_bf_scaffold_890_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22871..23365)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGW4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG59020.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
hypothetical protein
SCNpilot_cont_300_bf_scaffold_890_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23381..24115)
DNA (735bp) protein (245aa)
Glutaredoxin n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L821_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIZ36520.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
glutaredoxin rbh
SCNpilot_cont_300_bf_scaffold_890_24
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24406..24702)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ6_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50910.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
SCNpilot_cont_300_bf_scaffold_890_25
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24744..25640)
DNA (897bp) protein (299aa)
ATPase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483BF3
putative ATPase
Putative ATPase {ECO:0000313|EMBL:ACB51001.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
SCNpilot_cont_300_bf_scaffold_890_26
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25685..27574)
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000381D7F6 rbh
TraG_2 protein {ECO:0000313|EMBL:KIT14715.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
TraG/TraD family protein
SCNpilot_cont_300_bf_scaffold_890_27
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27907..28239
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T3G0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP78470.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
SCNpilot_cont_300_bf_scaffold_890_28
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28229..29614
DNA (1386bp) protein (462aa)
Relaxase/mobilization nuclease domain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y577_NITMU
Jannaschia aquimarina strain GSW-M26 jaqu_contig000066, whole genome shotgun sequence {ECO:0000313|EMBL:KIT14717.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
relaxase/mobilization nuclease domain-containing protein
SCNpilot_cont_300_bf_scaffold_890_29
unknown

Not on your lists

comp(29622..30176)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_890_30
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30198..31031)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B8R4_PARDP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL71908.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrif
Displaying items 1-30 of 45 in total

View Taxonomy