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SCNpilot_cont_300_bf_scaffold_970

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_970_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(327..554)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHJ3_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGT75302.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
SCNpilot_cont_300_bf_scaffold_970_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(664..1239)
DNA (576bp) protein (192aa)
Integrase, catalytic region n=2 Tax=Nitrobacter sp. Nb-311A RepID=A3WWY1_9BRAD
Integrase, catalytic region {ECO:0000313|EMBL:EAQ35508.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. N
integrase catalytic subunit
SCNpilot_cont_300_bf_scaffold_970_3
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2420
DNA (1029bp) protein (343aa)
UPI0003CF1096 related cluster n=2 Tax=unknown RepID=UPI0003CF1096 rbh
Transposase IS110 {ECO:0000313|EMBL:ESY77188.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC2
transposase IS116/IS110/IS902 family protein
SCNpilot_cont_300_bf_scaffold_970_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2884..3336
DNA (453bp) protein (151aa)
Ion transport 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLY4_NITHX
Ion transport 2
Ion transport 2 {ECO:0000313|EMBL:ABE62763.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (str
SCNpilot_cont_300_bf_scaffold_970_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3719..4099)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 RepID=S6JZ60_VIBNA
Uncharacterized protein {ECO:0000313|EMBL:KIF80076.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_970_6
unknown

Not on your lists

4221..4739
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_970_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4751..5002
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BQG8_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07825.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_cont_300_bf_scaffold_970_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5051..5614
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHY7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63458.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp.
SCNpilot_cont_300_bf_scaffold_970_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5693..6238
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9AD82_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEO91817.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
SCNpilot_cont_300_bf_scaffold_970_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6505..7359)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037A0E80
H+transporting two-sector ATPase subunit gamma
H+transporting two-sector ATPase gamma subunit {ECO:0000313|EMBL:ACE99603.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" s
SCNpilot_cont_300_bf_scaffold_970_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7359..8906)
DNA (1548bp) protein (516aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD23C rbh
F0F1 ATP synthase subunit alpha
SCNpilot_cont_300_bf_scaffold_970_12
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8881..9639)
DNA (759bp) protein (253aa)
ATP synthase subunit b n=3 Tax=Azotobacter vinelandii RepID=C1DEJ7_AZOVD
H+-transporting two-sector ATPase, B/B subunit
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
SCNpilot_cont_300_bf_scaffold_970_13
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9655..9900)
DNA (246bp) protein (82aa)
F0F1 ATP synthase subunit C n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TL55_TISMK
F0F1 ATP synthase subunit C
F0F1 ATP synthase subunit C {ECO:0000313|EMBL:AFK53493.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mob
SCNpilot_cont_300_bf_scaffold_970_14
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9887..10591)
DNA (705bp) protein (235aa)
atpB; ATP synthase F0, A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8F5_HYPSM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_cont_300_bf_scaffold_970_15
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..10887)
DNA (300bp) protein (100aa)
N-ATPase, AtpR subunit {ECO:0000313|EMBL:KGS00117.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
SCNpilot_cont_300_bf_scaffold_970_16
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10884..11183)
DNA (300bp) protein (100aa)
Putative H(+)-transporting ATP synthase 1 protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAB0_9SPHN
Putative F0F1-ATPase subunit {ECO:0000313|EMBL:KDM65380.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphili
F0F1-ATPase (fragment)
SCNpilot_cont_300_bf_scaffold_970_17
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11180..11602)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000374E21A
atpC; ATP synthase subunit epsilon 2
ATP synthase epsilon chain 2 {ECO:0000313|EMBL:CCB65655.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobiu
SCNpilot_cont_300_bf_scaffold_970_18
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11562..13037)
DNA (1476bp) protein (492aa)
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta 3 {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta 3 {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit
ATP synthase subunit beta 3 n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=ATPB3_BURXL rbh
SCNpilot_cont_300_bf_scaffold_970_19
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13389..13556
DNA (168bp) protein (56aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAH4_METSZ
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:CCD31979.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis s
SCNpilot_cont_300_bf_scaffold_970_20
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13755..14828
DNA (1074bp) protein (358aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAQ5_METSZ
phosphoenolpyruvate synthase
SCNpilot_cont_300_bf_scaffold_970_21
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..15243)
DNA (582bp) protein (194aa)
Cytochrome B561 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCT0_HYPSM
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:CCB66448.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain
SCNpilot_cont_300_bf_scaffold_970_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15639..16196)
DNA (558bp) protein (186aa)
Cytochrome B561 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM55_NITHX rbh
cytochrome B561 rbh
Cytochrome B561 {ECO:0000313|EMBL:ABE62692.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (str
SCNpilot_cont_300_bf_scaffold_970_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16216..16488)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM54_NITHX
Uncharacterized protein {ECO:0000313|EMBL:CEG09828.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_970_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16638..16952
DNA (315bp) protein (105aa)
Propeptide, PepSY amd peptidase M4 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM53_NITHX
peptidase
Propeptide, PepSY amd peptidase M4 {ECO:0000313|EMBL:ABE62694.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_970_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16952..17617
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM52_NITHX rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABE62695.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
SCNpilot_cont_300_bf_scaffold_970_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17614..19062
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM51_NITHX rbh
periplasmic sensor signal transduction histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_970_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19059..19337
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM50_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62697.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_970_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19352..20566
DNA (1215bp) protein (405aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM49_NITHX rbh
secretion protein HlyD rbh
Secretion protein HlyD {ECO:0000313|EMBL:ABE62698.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
SCNpilot_cont_300_bf_scaffold_970_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20568..23807
DNA (3240bp) protein (1080aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM48_NITHX rbh
heavy metal efflux pump CzcA rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABE62699.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sourc
SCNpilot_cont_300_bf_scaffold_970_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23999..24346
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM47_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62700.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
Displaying items 1-30 of 33 in total

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