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SCNpilot_cont_300_bf_scaffold_2004

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2004_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..383)
DNA (381bp) protein (127aa)
Transcription activator, effector binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ2_NITHX
transcription activator, effector binding
Transcription activator, effector binding protein {ECO:0000313|EMBL:ABE64305.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
SCNpilot_cont_300_bf_scaffold_2004_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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650..1534
DNA (885bp) protein (295aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTJ1_9BRAD
SCNpilot_cont_300_bf_scaffold_2004_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1534..2811
DNA (1278bp) protein (426aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ4_NITHX
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABE64303.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
SCNpilot_cont_300_bf_scaffold_2004_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3113..4783
DNA (1671bp) protein (557aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:ABE64302.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE64302.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ5_NITHX rbh
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_2004_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4826..5371)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ6_NITHX
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_2004_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5843..6649
DNA (807bp) protein (269aa)
Response regulator receiver n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTJ7_9BRAD rbh
Response regulator receiver {ECO:0000313|EMBL:EAQ36760.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. N
two-component response regulator rbh
SCNpilot_cont_300_bf_scaffold_2004_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6972..7367
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64298.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2004_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7396..7833)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64757.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2004_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7933..8301)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64296.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2004_10
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8620..8775
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNX2_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06019.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
SCNpilot_cont_300_bf_scaffold_2004_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..11021)
DNA (2166bp) protein (722aa)
Malate synthase G {ECO:0000255|HAMAP-Rule:MF_00641}; EC=2.3.3.9 {ECO:0000255|HAMAP-Rule:MF_00641};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
malate synthase G (EC:2.3.3.9)
Malate synthase G n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MASZ_NITHX
SCNpilot_cont_300_bf_scaffold_2004_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11222..13147)
DNA (1926bp) protein (642aa)
sulfate adenylyltransferase (EC:2.7.1.25 2.7.7.4) rbh
Adenylylsulfate kinase {ECO:0000313|EMBL:ABE64293.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ABE64293.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; N
Adenylylsulfate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK4_NITHX rbh
SCNpilot_cont_300_bf_scaffold_2004_13
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13173..14051)
DNA (879bp) protein (293aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4) rbh
Sulfate adenylyltransferase subunit 2 {ECO:0000313|EMBL:ABA06016.1}; EC=2.7.7.4 {ECO:0000313|EMBL:ABA06016.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
Sulfate adenylyltransferase subunit 2 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNX5_NITWN rbh
SCNpilot_cont_300_bf_scaffold_2004_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14197..15630
DNA (1434bp) protein (478aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABE64291.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABE64291.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacte
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK6_NITHX
uroporphyrin-III C-methyltransferase
SCNpilot_cont_300_bf_scaffold_2004_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15627..16370
DNA (744bp) protein (248aa)
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenylylsulfate reductase (Thioredoxin) {ECO:0000313|EMBL:ABE64290.1}; EC=1.8.4.8 {ECO:0000313|EMBL:ABE64290.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteob
Phosphoadenylylsulfate reductase (Thioredoxin) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK7_NITHX
SCNpilot_cont_300_bf_scaffold_2004_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16658..17647
DNA (990bp) protein (330aa)
Thiosulphate-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK8_NITHX
thiosulfate-binding protein
Thiosulphate-binding protein {ECO:0000313|EMBL:ABE64289.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sourc
SCNpilot_cont_300_bf_scaffold_2004_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17723..18508
DNA (786bp) protein (262aa)
Sulfate ABC transporter, permease protein CysT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHK9_NITHX
sulfate ABC transporter permease
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:ABE64288.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source
SCNpilot_cont_300_bf_scaffold_2004_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18521..19390
DNA (870bp) protein (290aa)
Sulfate ABC transporter, permease protein CysW n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL0_NITHX rbh
sulfate ABC transporter permease rbh
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:ABE64287.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source
SCNpilot_cont_300_bf_scaffold_2004_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19380..20429
DNA (1050bp) protein (350aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; Ta
Sulphate transport system permease protein 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL1_NITHX
sulfate transporter permease
SCNpilot_cont_300_bf_scaffold_2004_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20499..21008
DNA (510bp) protein (170aa)
Allergen V5/Tpx-1 related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL2_NITHX
Allergen V5/Tpx-1 related
Allergen V5/Tpx-1 related protein {ECO:0000313|EMBL:ABE64285.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_2004_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21193..21366
DNA (174bp) protein (58aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL4_NITHX
3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ABE64283.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" so
Displaying 21 items

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