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SCNpilot_cont_300_bf_scaffold_2548

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2548_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2428
DNA (2427bp) protein (809aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac
DNA gyrase subunit A n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZK5_9BRAD
DNA gyrase subunit A
SCNpilot_cont_300_bf_scaffold_2548_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..2986)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRN0_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05061.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2548_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3493..3777
DNA (285bp) protein (95aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZK2_9BRAD
SCNpilot_cont_300_bf_scaffold_2548_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3759..3944
DNA (186bp) protein (62aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-
Phosphopantetheine adenylyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=COAD_NITHX
SCNpilot_cont_300_bf_scaffold_2548_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3978..4538
DNA (561bp) protein (187aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8) rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRN2_NITWN rbh
SCNpilot_cont_300_bf_scaffold_2548_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4713..4985
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMG5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62582.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2548_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4961..5425
DNA (465bp) protein (155aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZL0_9BRAD rbh
Peptidyl-prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:EAQ34580.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_2548_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5539..6621
DNA (1083bp) protein (361aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMG3_NITHX rbh
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase rbh
SCNpilot_cont_300_bf_scaffold_2548_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6618..7751
DNA (1134bp) protein (378aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMG2_NITHX rbh
SCNpilot_cont_300_bf_scaffold_2548_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..7991)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMG1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62586.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8213..9190
DNA (978bp) protein (326aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Ni
Cysteine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMG0_NITHX rbh
cysteine synthase
SCNpilot_cont_300_bf_scaffold_2548_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9255..9752)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRN7_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05054.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2548_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9769..10119)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMF7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62590.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2548_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10281..10523)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGN8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64609.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10912..11181)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNW6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62081.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11537..14110)
DNA (2574bp) protein (858aa)
Glycosyl transferase, family 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMF4_NITHX
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE62593.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sou
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_2548_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14302..14904)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMF3_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62594.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_2548_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15129..16754
DNA (1626bp) protein (542aa)
beta (1-6) glucans synthase (EC:3.2.1.58) rbh
Putative beta (1-6) glucans synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZP4_9BRAD rbh
Putative beta (1-6) glucans synthase {ECO:0000313|EMBL:EAQ34545.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobac
SCNpilot_cont_300_bf_scaffold_2548_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16714..17151)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMF1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62596.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17280..18602)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMF0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62597.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..20111
DNA (1359bp) protein (453aa)
Bifunctional protein GlmU {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.7.7.23 {ECO:0000255|HAMAP-Rule:MF_01631};; N-a
Bifunctional protein GlmU n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLMU_NITHX
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
SCNpilot_cont_300_bf_scaffold_2548_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20178..20417)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QME8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62599.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_2548_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20960..21424)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4L7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97722.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
SCNpilot_cont_300_bf_scaffold_2548_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21743..22036
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDH4_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43908.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
SCNpilot_cont_300_bf_scaffold_2548_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22752..23384
DNA (633bp) protein (211aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QME6_NITHX
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ABE62601.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.
SCNpilot_cont_300_bf_scaffold_2548_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23584..23679
DNA (96bp) protein (32aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=TATA_RHOPS
tatA; twin-arginine translocation protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
Displaying 26 items

View Taxonomy