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SCNpilot_cont_300_bf_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_168_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(487..2382)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQM4_HALH1
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_168_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2506..3234
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=K9CP32_SPHYA
GntR family transcriptional regulator {ECO:0000313|EMBL:KGB56694.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_168_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3231..3935)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6736
GntR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_168_4
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4104..5249
DNA (1146bp) protein (382aa)
Glycosyl hydrolase family 88 n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P662_9CAUL
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ESQ82594.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacau
glycoside hydrolase family protein
SCNpilot_cont_300_bf_scaffold_168_5
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5246..6784
DNA (1539bp) protein (513aa)
Major facilitator transporter n=1 Tax=Cellvibrio sp. BR RepID=I3I9K8_9GAMM
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AIF99896.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas
SCNpilot_cont_300_bf_scaffold_168_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6781..7665)
DNA (885bp) protein (295aa)
fructokinase (EC:2.7.1.4)
Fructokinase {ECO:0000313|EMBL:AEN72058.1}; EC=2.7.1.4 {ECO:0000313|EMBL:AEN72058.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
Fructokinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE66_RHOMR
SCNpilot_cont_300_bf_scaffold_168_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7668..9440)
DNA (1773bp) protein (591aa)
Uncharacterized protein id=3416279 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_168_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9621..12263
DNA (2643bp) protein (881aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003627C80 rbh
hypothetical protein
TonB-dependent receptor Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_300_bf_scaffold_168_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..12773)
DNA (444bp) protein (148aa)
Signal-transduction protein with CBS domains n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3W5_AZOS1
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:KJC53418.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
inosine-5-monophosphate dehydrogenase
SCNpilot_cont_300_bf_scaffold_168_10
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12818..13666)
DNA (849bp) protein (283aa)
Pirin domain protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PYA7_9RHIZ rbh
Pirin domain protein {ECO:0000313|EMBL:CCM78943.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
Pirin domain-containing protein
SCNpilot_cont_300_bf_scaffold_168_11
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13693..14073)
DNA (381bp) protein (127aa)
Putative transmembrane quinol oxidase subunit n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q3I3_9RHIZ
Putative transmembrane quinol oxidase subunit {ECO:0000313|EMBL:CCM78942.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
hypothetical protein
SCNpilot_cont_300_bf_scaffold_168_12
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14085..14711)
DNA (627bp) protein (209aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PQM3_9RHIZ
azoR; FMN-dependent NADH-azoreductase
SCNpilot_cont_300_bf_scaffold_168_13
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14816..15748
DNA (933bp) protein (311aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_168_14
unknown

Not on your lists

comp(15883..16302)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_168_15
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16299..17768)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630566
Protein involved in formation of curli polymers {ECO:0000313|EMBL:EJL34460.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
curli production assembly/transport component csgg
SCNpilot_cont_300_bf_scaffold_168_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18161..18547
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4RFK8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAO38835.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
Glyoxalase-like domain protein
SCNpilot_cont_300_bf_scaffold_168_17
unknown

Not on your lists

18549..19118
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_168_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19167..19853
DNA (687bp) protein (229aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNG2_RUBGI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAL94549.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax
SCNpilot_cont_300_bf_scaffold_168_19

Not on your lists

20037..21290
DNA (1254bp) protein (418aa)
Nucleoside H+ symporter n=1 Tax=uncultured organism RepID=T1WA23_9ZZZZ rbh
Nucleoside H+ symporter {ECO:0000313|EMBL:AGU10965.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_168_20

Not on your lists

21287..22351
DNA (1065bp) protein (355aa)
Xylose isomerase-like TIM barrel n=1 Tax=uncultured organism RepID=T1W8H6_9ZZZZ rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:AGU10966.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
AP endonuclease
SCNpilot_cont_300_bf_scaffold_168_21

Not on your lists

22384..23532
DNA (1149bp) protein (383aa)
Oxidoreductase family, NAD-binding Rossmann fold n=1 Tax=uncultured organism RepID=T1W7L4_9ZZZZ rbh
Oxidoreductase family, NAD-binding Rossmann fold {ECO:0000313|EMBL:AGU10967.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_168_22

Not on your lists

23529..23918
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W897_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU10968.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cytochrome C
SCNpilot_cont_300_bf_scaffold_168_23

Not on your lists

23915..24853
DNA (939bp) protein (313aa)
Xylose isomerase-like TIM barrel n=1 Tax=uncultured organism RepID=T1W8Z4_9ZZZZ rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:AGU10969.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
xylose isomerase
SCNpilot_cont_300_bf_scaffold_168_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24850..25671
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631342 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74265.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_168_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25668..26237
DNA (570bp) protein (190aa)
Gluconate 2-dehydrogenase subunit 3 n=1 Tax=uncultured organism RepID=T1W8I1_9ZZZZ rbh
transcriptional initiation protein Tat rbh
Transcriptional initiation protein Tat {ECO:0000313|EMBL:AJP74266.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
SCNpilot_cont_300_bf_scaffold_168_26

Not on your lists

26234..27079
DNA (846bp) protein (282aa)
Xylose isomerase-like TIM barrel n=1 Tax=uncultured organism RepID=T1W7M0_9ZZZZ rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:AGU10972.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
xylose isomerase
SCNpilot_cont_300_bf_scaffold_168_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27101..28777
DNA (1677bp) protein (559aa)
GMC family oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631345 rbh
GMC family oxidoreductase rbh
GMC family oxidoreductase {ECO:0000313|EMBL:AJP71263.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_168_28
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28797..29438)
DNA (642bp) protein (214aa)
UbiE/COQ5 family methlytransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI23_9RHIZ
UbiE/COQ5 family methlytransferase {ECO:0000313|EMBL:CCV03865.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
methyltransferase
SCNpilot_cont_300_bf_scaffold_168_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29768..30367
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UEN3_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47376.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
SCNpilot_cont_300_bf_scaffold_168_30
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30446..31807)
DNA (1362bp) protein (454aa)
Transcriptional regulator, GntR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBK2_PARDP rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABL72896.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
Displaying items 1-30 of 252 in total

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