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SCNpilot_cont_300_bf_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_269_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..544
DNA (543bp) protein (181aa)
dolichol monophosphate mannose synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003048DE8
dolichol monophosphate mannose synthase
Dolichol monophosphate mannose synthase {ECO:0000313|EMBL:AJP71066.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
SCNpilot_cont_300_bf_scaffold_269_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(554..1894)
DNA (1341bp) protein (447aa)
dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI000263046D rbh
dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:AJP71067.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingo
SCNpilot_cont_300_bf_scaffold_269_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2003..3211
DNA (1209bp) protein (403aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=Sphingomonas elodea RepID=UPI0002630597 rbh
O-succinylhomoserine sulfhydrylase rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AJP71018.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
SCNpilot_cont_300_bf_scaffold_269_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3211..3609
DNA (399bp) protein (133aa)
magnesium transporter ApaG n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031E0408
magnesium transporter ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
SCNpilot_cont_300_bf_scaffold_269_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3606..4397
DNA (792bp) protein (264aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630599 rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP71019.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_cont_300_bf_scaffold_269_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4488..5321
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB86_PHEZH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79731.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_269_7
Sphingomonas sp. PAMC 26605, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5318..5581
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA66F
SCNpilot_cont_300_bf_scaffold_269_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5748..7052)
DNA (1305bp) protein (435aa)
beta-lactamase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA670 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74222.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7184..9166)
DNA (1983bp) protein (661aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1609977 species="Ba
DNA topoisomerase IV subunit B n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F9777E rbh
DNA topoisomerase IV subunit B
SCNpilot_cont_300_bf_scaffold_269_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9255..10778)
DNA (1524bp) protein (508aa)
Methyl-accepting chemotaxis protein n=1 Tax=Sphingobium sp. AP49 RepID=J2W9Q1_9SPHN rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJK79355.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingo
methyl-accepting chemotaxis sensory transducer rbh
SCNpilot_cont_300_bf_scaffold_269_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10775..11089)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Sphingomonas wittichii RepID=A5VD00_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70166.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
SCNpilot_cont_300_bf_scaffold_269_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11147..11728)
DNA (582bp) protein (194aa)
5-demethoxyubiquinone hydroxylase, mitochondrial {ECO:0000256|SAAS:SAAS00231976}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00276250};; EC=1.14.13.- {ECO:0000256|SAAS:SAAS00231964};; TaxID=595537 species="Bact
Ubiquinone biosynthesis protein COQ7 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1S1_VARPE
ubiquinone biosynthesis protein coq7
SCNpilot_cont_300_bf_scaffold_269_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11735..12388)
DNA (654bp) protein (218aa)
GcrA cell cycle regulator n=1 Tax=Sphingomonas melonis RepID=UPI00036A6F95
GcrA cell cycle regulator
GcrA cell cycle regulator {ECO:0000313|EMBL:AJP70897.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_269_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12444..13283
DNA (840bp) protein (280aa)
multidrug ABC transporter permease n=1 Tax=Sphingomonas elodea RepID=UPI0002632218 rbh
multidrug ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
SCNpilot_cont_300_bf_scaffold_269_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13445..14641
DNA (1197bp) protein (399aa)
argD; acetylornithine transaminase protein (EC:2.6.1.11) rbh
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=745310 species="Bacteria; Prot
acetylornithine aminotransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248943D rbh
SCNpilot_cont_300_bf_scaffold_269_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14785..15699
DNA (915bp) protein (305aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI000263221C rbh
ornithine carbamoyltransferase
SCNpilot_cont_300_bf_scaffold_269_17
unknown

Not on your lists

15710..16132
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_269_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16232..17158
DNA (927bp) protein (309aa)
molecular chaperone Hsp33 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031A6A22 rbh
molecular chaperone Hsp33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. W
SCNpilot_cont_300_bf_scaffold_269_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17230..17637
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC402
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70901.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17858..18493
DNA (636bp) protein (212aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Sphingomonas elodea RepID=UPI000263221F
7-cyano-7-deazaguanine synthase
SCNpilot_cont_300_bf_scaffold_269_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18506..19138
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-cyano-7-deazaguanine reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002632220 rbh
7-cyano-7-deazaguanine reductase
SCNpilot_cont_300_bf_scaffold_269_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19288..19968)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F65BD3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74201.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20151..20387)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000300075A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70904.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20502..21149)
DNA (648bp) protein (216aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D4C8A2 rbh
octanoyltransferase
SCNpilot_cont_300_bf_scaffold_269_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21238..22071
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003122A24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70905.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22068..22808
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036D6880
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70906.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_269_27
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22772..23371)
DNA (600bp) protein (200aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingomonas elodea RepID=UPI0002631ACA rbh
GCN5 family acetyltransferase {ECO:0000313|EMBL:AJR22785.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_269_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23374..24216)
DNA (843bp) protein (281aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
coproporphyrinogen III oxidase n=1 Tax=Sphingomonas elodea RepID=UPI0002631ACB rbh
coproporphyrinogen III oxidase
SCNpilot_cont_300_bf_scaffold_269_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24213..24662)
DNA (450bp) protein (150aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
rRNA methyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000309DF77
rRNA methyltransferase
SCNpilot_cont_300_bf_scaffold_269_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24774..25415
DNA (642bp) protein (214aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494, ECO:0000313|EMBL:AJP74203.1}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1609977 species="Bacteria; Proteo
ubiquinol-cytochrome C reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631ACD rbh
ubiquinol-cytochrome c reductase iron-sulfur subunit
Displaying items 1-30 of 180 in total

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