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SCNpilot_cont_300_bf_scaffold_843

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_843_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196..483
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AGQ5_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EMS96977.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
barstar family protein
SCNpilot_cont_300_bf_scaffold_843_2
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(489..1790)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thior
signal transduction histidine-protein kinase BaeS n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA121 rbh
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_843_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1861..2073)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036FA123
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP71532.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
SCNpilot_cont_300_bf_scaffold_843_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2178..3419)
DNA (1242bp) protein (414aa)
succinylarginine dihydrolase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A97 rbh
succinylarginine dihydrolase
Succinylarginine dihydrolase {ECO:0000313|EMBL:AJP71534.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
SCNpilot_cont_300_bf_scaffold_843_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3419..4429)
DNA (1011bp) protein (337aa)
arginine N-succinyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000316AE78 rbh
arginine N-succinyltransferase
Arginine N-succinyltransferase {ECO:0000313|EMBL:AJP71535.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_843_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4426..5634)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A99 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74323.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_843_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5755..6669)
DNA (915bp) protein (305aa)
salt-induced outer membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A9A rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP71536.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
SCNpilot_cont_300_bf_scaffold_843_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6714..7193)
DNA (480bp) protein (160aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D50
RNA pyrophosphohydrolase
SCNpilot_cont_300_bf_scaffold_843_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7315..8223
DNA (909bp) protein (303aa)
histone deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D4F rbh
histone deacetylase rbh
Histone deacetylase {ECO:0000313|EMBL:AJP71538.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. W
SCNpilot_cont_300_bf_scaffold_843_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8302..10245
DNA (1944bp) protein (648aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289472A
2-oxoglutarate ferredoxin oxidoreductase subunit alpha
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:AJP71539.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingo
SCNpilot_cont_300_bf_scaffold_843_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10421..11455
DNA (1035bp) protein (345aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002882255
2-oxoacid:ferredoxin oxidoreductase subunit beta
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AJP71540.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.
SCNpilot_cont_300_bf_scaffold_843_12
unknown

Not on your lists

11463..11597
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_843_13
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11594..12760
DNA (1167bp) protein (389aa)
Conserved hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILR0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL25311.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
hypothetical protein
SCNpilot_cont_300_bf_scaffold_843_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12813..14054
DNA (1242bp) protein (414aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sphingomonas elodea RepID=UPI0002631AB2 rbh
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30017.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
cyclopropane-fatty-acyl-phospholipid synthase
SCNpilot_cont_300_bf_scaffold_843_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14051..15232
DNA (1182bp) protein (394aa)
UPI0003CFD3DB related cluster n=1 Tax=unknown RepID=UPI0003CFD3DB rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AJP74324.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
SCNpilot_cont_300_bf_scaffold_843_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15270..15983)
DNA (714bp) protein (238aa)
oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI00026308BA rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AJP71543.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
SCNpilot_cont_300_bf_scaffold_843_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15991..17451)
DNA (1461bp) protein (487aa)
amidophosphoribosyltransferase (EC:2.4.2.14) rbh
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI00026308B9 rbh
SCNpilot_cont_300_bf_scaffold_843_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17583..17837
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E4B302
Rho termination factor
Rho termination factor {ECO:0000313|EMBL:AIT05448.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas ta
SCNpilot_cont_300_bf_scaffold_843_19
unknown

Not on your lists

17834..17959
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_843_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17969..18325
DNA (357bp) protein (119aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sphingomonas elodea RepID=UPI00026308B6
phosphoribosyl-AMP cyclohydrolase
SCNpilot_cont_300_bf_scaffold_843_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18322..18828
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC53A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71548.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_843_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19027..19452
DNA (426bp) protein (142aa)
transcriptional regulator n=1 Tax=Sphingomonas RepID=UPI00026308B4
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJP71547.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_843_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19470..21272
DNA (1803bp) protein (601aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003150450 rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71546.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_843_24
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21692..22588
DNA (897bp) protein (299aa)
Integrase family protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D8L1_9SPHN
Integrase family protein {ECO:0000313|EMBL:EJK86139.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp
transposase
Displaying 24 items

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