ggKbase home page

SCNpilot_cont_300_bf_scaffold_3360

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3360_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..677
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIP2_PSEAI
Arabinose efflux permease family protein {ECO:0000313|EMBL:KEZ20917.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
major facilitator superfamily mfs_1
SCNpilot_cont_300_bf_scaffold_3360_2
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

700..1575
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PY53_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ93311.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3360_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1617..2432)
DNA (816bp) protein (272aa)
Regulatory protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HYE6_AZOC5
lysR; regulatory protein
Regulatory protein {ECO:0000313|EMBL:BAF87604.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
SCNpilot_cont_300_bf_scaffold_3360_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2516..3475
DNA (960bp) protein (320aa)
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI000367B158
ydbC; Putative oxidoreductase YdbC
Putative oxidoreductase YdbC {ECO:0000313|EMBL:CDN52565.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;"
SCNpilot_cont_300_bf_scaffold_3360_5
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3530..4456)
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI0003752027 rbh
LysR family transcriptional regulator Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3360_6
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4582..5280
DNA (699bp) protein (233aa)
Pirin domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMD5_BRESC rbh
pirin
Pirin domain protein {ECO:0000313|EMBL:ADL02061.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvi
SCNpilot_cont_300_bf_scaffold_3360_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5316..6146
DNA (831bp) protein (277aa)
Non-heme haloperoxidase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFP6_RHIRD
Non-heme haloperoxidase {ECO:0000313|EMBL:EGP54551.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
alpha/beta hydrolase family protein
SCNpilot_cont_300_bf_scaffold_3360_8
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6335..7945)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00036B792A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADL01728.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" sourc
SCNpilot_cont_300_bf_scaffold_3360_9
unknown

Not on your lists

comp(7921..8412)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3360_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8409..8807)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00036B792A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACG78924.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
Displaying 10 items

View Taxonomy