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SCNpilot_cont_300_bf_scaffold_3632

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3632_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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224..796
DNA (573bp) protein (191aa)
Protein-L-isoaspartate carboxylmethyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2PUW1_9CAUL
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:EJL31517.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3632_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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943..2436
DNA (1494bp) protein (498aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7T8_CAUSK rbh
TolC family type I secretion outer membrane protein rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:ABZ71276.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacter
SCNpilot_cont_300_bf_scaffold_3632_3
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2817..3110
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJ12_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG10100.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
SCNpilot_cont_300_bf_scaffold_3632_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3261..5918
DNA (2658bp) protein (886aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Valine--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R988_PHEZH rbh
valS; valyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_3632_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5924..6658
DNA (735bp) protein (245aa)
Hemolysin A n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZ49_CAUCE rbh
Hemolysin A {ECO:0000313|EMBL:ENZ81550.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;
hemolysin A
SCNpilot_cont_300_bf_scaffold_3632_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6791..7678)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZR97_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL21344.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3632_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7934..9199
DNA (1266bp) protein (422aa)
RNA methyltransferase, TrmA family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
RNA methyltransferase, TrmA family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R992_PHEZH rbh
RNA methyltransferase, TrmA family
SCNpilot_cont_300_bf_scaffold_3632_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9196..10263)
DNA (1068bp) protein (356aa)
DNA repair photolyase n=1 Tax=Caulobacter sp. AP07 RepID=J2P7P5_9CAUL rbh
DNA repair photolyase {ECO:0000313|EMBL:EJL23107.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP0
radical SAM domain-containing protein
SCNpilot_cont_300_bf_scaffold_3632_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10364..11659
DNA (1296bp) protein (432aa)
PREDICTED: heat shock 70 kDa protein 13-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C170AE rbh
molecular chaperone DnaK; K04046 hypothetical chaperone protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
chaperone protein dnaK
SCNpilot_cont_300_bf_scaffold_3632_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11717..12304
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90525.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3632_11
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12382..12837
DNA (456bp) protein (152aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; C
4-carboxymuconolactone decarboxylase domain protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TW59_9DELT
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3632_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12840..14366
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor SigJ n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X251_RHIFR
sigJ; RNA polymerase sigma factor SigJ
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:AFL49957.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizob
SCNpilot_cont_300_bf_scaffold_3632_13
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..15165
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4Q422_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ73993.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3632_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15197..15652
DNA (456bp) protein (152aa)
glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
Glycosyltransferase involved in cell wall biogenesis n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H505_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK23312.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
SCNpilot_cont_300_bf_scaffold_3632_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15649..16101)
DNA (453bp) protein (151aa)
Lytic transglycosylase catalytic n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJ25_CAUST
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADG10113.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
Displaying 15 items

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