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SCNpilot_cont_300_bf_scaffold_3810

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3810_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
acylglycerol lipase (EC:3.1.1.23)
UPI0003D01796 related cluster n=1 Tax=unknown RepID=UPI0003D01796
Acylglycerol lipase {ECO:0000313|EMBL:ESZ19627.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48
SCNpilot_cont_300_bf_scaffold_3810_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(595..957)
DNA (363bp) protein (121aa)
Putative redox-sensing transcriptional regulator n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNZ5_9BRAD
Putative redox-sensing transcriptional regulator {ECO:0000313|EMBL:EGP07078.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhiz
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3810_3
Pseudomonas sp. GM79, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1060..1656
DNA (597bp) protein (199aa)
Putative flavoprotein n=1 Tax=Pseudomonas sp. GM79 RepID=J3I840_9PSED
Putative flavoprotein {ECO:0000313|EMBL:EJN17853.1}; TaxID=1144338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM7
nadph-dependent fmn reductase
SCNpilot_cont_300_bf_scaffold_3810_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..2033)
DNA (381bp) protein (127aa)
YCII-like protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAG2_9RHIZ
YCII-like protein {ECO:0000313|EMBL:EHH11276.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae
YciI-related domain-containing protein
SCNpilot_cont_300_bf_scaffold_3810_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2188..2934
DNA (747bp) protein (249aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteracea
signal peptidase I n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036AAAD6 rbh
SCNpilot_cont_300_bf_scaffold_3810_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..3298)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T517_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72544.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_cont_300_bf_scaffold_3810_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3697..4167
DNA (471bp) protein (157aa)
Uncharacterized protein (Fragment) n=1 Tax=Caulobacter sp. AP07 RepID=J3AL81_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL33491.1}; Flags: Precursor; Fragment;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3810_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4188..4703)
DNA (516bp) protein (172aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Caulobacter crescentus OR37 RepID=R0EDW2_CAUCE
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
sugar fermentation stimulation protein
SCNpilot_cont_300_bf_scaffold_3810_9
unknown

Not on your lists

4991..5443
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3810_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..5696)
DNA (207bp) protein (69aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIF9_CAUST
sugar fermentation stimulation protein
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;"
SCNpilot_cont_300_bf_scaffold_3810_11
unknown

Not on your lists

comp(5887..6336)
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3810_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6417..7181)
DNA (765bp) protein (255aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Caulobacter crescentus OR37 RepID=R0EDW2_CAUCE rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
sugar fermentation stimulation protein
SCNpilot_cont_300_bf_scaffold_3810_13
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7230..7976
DNA (747bp) protein (249aa)
Putative nuleotide-utilizing enzyme, moeA n=1 Tax=Caulobacter crescentus OR37 RepID=R0E1M3_CAUCE rbh
nucleotide-utilizing enzyme/competence-damage associated protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
competence/damage-inducible protein CinA
SCNpilot_cont_300_bf_scaffold_3810_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8296..8877
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEI6_SPHWW
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3810_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9287..10978
DNA (1692bp) protein (564aa)
Quinohemoprotein amine dehydrogenase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IW33_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54787.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
quinohemoprotein amine dehydrogenase, 60 kDa subunit
SCNpilot_cont_300_bf_scaffold_3810_16
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10975..12423
DNA (1449bp) protein (483aa)
Radical SAM protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZK1_9SPHN
Radical SAM protein {ECO:0000313|EMBL:KHK90439.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
radical SAM family protein
SCNpilot_cont_300_bf_scaffold_3810_17
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12420..12764
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E5F78A
Quinohemoprotein amine dehydrogenase {ECO:0000313|EMBL:KHK90193.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3810_18
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12819..13913
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K0F9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB29994.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3810_19
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13923..14219
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000361F156
Uncharacterized protein {ECO:0000313|EMBL:AHE54783.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_3810_20
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..14892
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IMD6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB29995.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3810_21
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14889..16595
DNA (1707bp) protein (569aa)
ABC transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IW40_9SPHN rbh
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=GWF1_Sphingomonadales_63_6_curated
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_3810_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16582..17340
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZK7_9SPHN
Subtilisin-like serine proteases {ECO:0000313|EMBL:GAO54121.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3810_23
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17408..19996)
DNA (2589bp) protein (863aa)
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MK15_9SPHN rbh
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_3810_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20558..22387
DNA (1830bp) protein (610aa)
Sulfotransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3V3_NOVAD rbh
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABD27470.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aro
SCNpilot_cont_300_bf_scaffold_3810_25
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22324..23748)
DNA (1425bp) protein (475aa)
Amino acid/peptide transporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCN3_PHEZH
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
amino acid/peptide transporter
SCNpilot_cont_300_bf_scaffold_3810_26
unknown

Not on your lists

24062..24337
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3810_27
Hyphomicrobium zavarzinii, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24477..25877
DNA (1401bp) protein (467aa)
Probable isopentenyl-diphosphate delta isomerase {ECO:0000313|EMBL:CAF31281.1}; EC=5.3.3.2 {ECO:0000313|EMBL:CAF31281.1};; TaxID=48292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
Probable isopentenyl-diphosphate delta isomerase n=1 Tax=Hyphomicrobium zavarzinii RepID=Q7AYA7_9RHIZ rbh
type I phosphodiesterase/nucleotide pyrophosphatase
SCNpilot_cont_300_bf_scaffold_3810_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25867..26364
DNA (498bp) protein (166aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthetase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR8_9BURK
3-dehydroquinate synthetase {ECO:0000313|EMBL:EHR70330.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
SCNpilot_cont_300_bf_scaffold_3810_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26339..27067
DNA (729bp) protein (243aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000313|EMBL:ABE61834.1}; EC=4.2.3.4 {ECO:0000313|EMBL:ABE61834.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
3-dehydroquinate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPL3_NITHX
SCNpilot_cont_300_bf_scaffold_3810_30
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27064..27426
DNA (363bp) protein (121aa)
Xylose isomerase-like enzyme n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR7_9BURK
Xylose isomerase-like enzyme {ECO:0000313|EMBL:EHR70329.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
Displaying 30 items

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