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SCNpilot_cont_300_bf_scaffold_3976

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3976_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..488)
DNA (486bp) protein (162aa)
PREDICTED: hippocampus abundant transcript-like protein 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C175A1
Arabinose efflux permease family protein {ECO:0000313|EMBL:ENZ82993.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_3976_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(554..1486)
DNA (933bp) protein (311aa)
Aldo/keto reductase n=1 Tax=Burkholderia sp. SJ98 RepID=K8QXJ9_9BURK
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Oxidoreductase, putative aldo/keto reductase (Tat pathway signal)
SCNpilot_cont_300_bf_scaffold_3976_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1486..2817)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8D3_SORCE
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3976_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2970..3380)
DNA (411bp) protein (137aa)
50S ribosomal protein L17 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RL17_CAUCN
rplQ; LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_3976_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3537..4553)
DNA (1017bp) protein (339aa)
rpoA; DNA-directed RNA polymerase alpha chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RPOA_CAUCN rbh
SCNpilot_cont_300_bf_scaffold_3976_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4626..5018)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Caulobacter crescentus OR37 RepID=R0D2Y8_CAUCE
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
30S ribosomal protein S11
SCNpilot_cont_300_bf_scaffold_3976_7
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5028..5396)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PWU9_9CAUL
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimo
SCNpilot_cont_300_bf_scaffold_3976_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6107)
DNA (507bp) protein (169aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
adk; adenylate kinase/nucleoside-diphosphate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD1_BREDI
SCNpilot_cont_300_bf_scaffold_3976_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6142..7494)
DNA (1353bp) protein (451aa)
Protein translocase subunit SecY n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2E2_CAUSK rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
secY; preprotein translocase subunit SecY rbh
SCNpilot_cont_300_bf_scaffold_3976_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7601..8083)
DNA (483bp) protein (161aa)
50S ribosomal protein L15 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RL15_PHEZH
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylo
SCNpilot_cont_300_bf_scaffold_3976_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8206..8388)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4QDY4_9CAUL
50S ribosomal protein L30
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_3976_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8394..8996)
DNA (603bp) protein (201aa)
30S ribosomal protein S5 n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPN0_CAUCE rbh
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caul
SCNpilot_cont_300_bf_scaffold_3976_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8983..9324)
DNA (342bp) protein (114aa)
50S ribosomal protein L18 n=1 Tax=Caulobacter sp. AP07 RepID=J2QBY1_9CAUL
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
rplR; 50S ribosomal protein L18
SCNpilot_cont_300_bf_scaffold_3976_14
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9327..9860)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFZ3_CAUST
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulo
SCNpilot_cont_300_bf_scaffold_3976_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9862..10260)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RS8_CAUCN
rpsH; SSU ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter c
SCNpilot_cont_300_bf_scaffold_3976_16
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10274..10579)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFZ1_CAUST
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_3976_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10598..11158)
DNA (561bp) protein (187aa)
50S ribosomal protein L5 n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00035C7A98 rbh
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
rplE; 50S ribosomal protein L5 rbh
SCNpilot_cont_300_bf_scaffold_3976_18
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11151..11465)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Caulobacter crescentus OR37 RepID=R0EC09_CAUCE
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
rplX; LSU ribosomal protein L24P
SCNpilot_cont_300_bf_scaffold_3976_19
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11465..11818)
DNA (354bp) protein (118aa)
50S ribosomal protein L14 n=2 Tax=Caulobacter RepID=RL14_CAUSK
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
Displaying 19 items

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