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SCNpilot_cont_300_bf_scaffold_1152

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1152_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1716)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E4S5_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ80583.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1152_2
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1844..2590)
DNA (747bp) protein (249aa)
Dehydrogenase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WAV4_9BURK rbh
short chain dehydrogenase family protein
Oxidoreductase {ECO:0000313|EMBL:AKE03954.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="
SCNpilot_cont_300_bf_scaffold_1152_3
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2711..3049
DNA (339bp) protein (113aa)
Regulatory protein ArsR n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4E9_ACISM
ArsR family transcriptional regulator
Regulatory protein ArsR {ECO:0000313|EMBL:ADW68276.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC
SCNpilot_cont_300_bf_scaffold_1152_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3046..5127)
DNA (2082bp) protein (694aa)
Signal transduction histidine kinase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVQ1_CAUCE rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:ENZ80591.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caul
cell cycle histidine kinase CckA rbh
SCNpilot_cont_300_bf_scaffold_1152_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..6232)
DNA (1083bp) protein (361aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Caulobacter sp. AP07 RepID=J2H702_9CAUL rbh
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
flhB; flagellar biosynthesis protein FlhB
SCNpilot_cont_300_bf_scaffold_1152_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6237..6992)
DNA (756bp) protein (252aa)
Flagellar biosynthetic protein FliR n=1 Tax=Caulobacter sp. AP07 RepID=J2PU01_9CAUL rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Cauloba
fliR; flagellar biosynthesis protein FliR
SCNpilot_cont_300_bf_scaffold_1152_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7003..7266)
DNA (264bp) protein (88aa)
Flagellar biosynthetic protein FliQ n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=FLIQ_CAUCR
fliQ; flagellar biosynthesis protein FliQ
Flagellar biosynthetic protein FliQ; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC
SCNpilot_cont_300_bf_scaffold_1152_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7364..7828
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:ACG78575.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_1152_9
unknown

Not on your lists

comp(7772..8077)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1152_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8207..9766)
DNA (1560bp) protein (520aa)
Periplasmic glycine betaine/choline-binding lipoprotein of an ABC-type transport system n=1 Tax=Caulobacter crescentus OR37 RepID=R0CYY3_CAUCE rbh
substrate-binding region of ABC-type glycine betaine transport system; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein Tax=RIF
glycine betaine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1152_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..10667)
DNA (912bp) protein (304aa)
ABC transporter ATP-binding protein n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037164A1 rbh
ATP-binding ABC transporter protein
ATP-binding ABC transporter protein {ECO:0000313|EMBL:ACG77342.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="P
SCNpilot_cont_300_bf_scaffold_1152_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10710..11015)
DNA (306bp) protein (102aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Caulobacter sp. AP07 RepID=J2PIB7_9CAUL
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria
flagellar hook-basal body complex subunit FliE
SCNpilot_cont_300_bf_scaffold_1152_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11029..11448)
DNA (420bp) protein (140aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Caulobacter crescentus OR37 RepID=R0CYY8_CAUCE
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulo
flgC; flagellar basal-body rod protein flgC
SCNpilot_cont_300_bf_scaffold_1152_14
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11463..11918)
DNA (456bp) protein (152aa)
Flagellar basal body protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CYD6_CAUCE
flgB; flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
flgB; flagellar basal-body rod protein FlgB
SCNpilot_cont_300_bf_scaffold_1152_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12025..12330
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EK21_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ81492.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
fliO protein
SCNpilot_cont_300_bf_scaffold_1152_16
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12327..13124
DNA (798bp) protein (266aa)
Flagellar biosynthesis protein FliP n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGX0_PHEZH rbh
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
fliP; flagellar biosynthesis protein FliP
SCNpilot_cont_300_bf_scaffold_1152_17
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13165..13584
DNA (420bp) protein (140aa)
Fe-S metabolism associated SufE n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMB2_CAUST
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:ADG11635.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacte
SCNpilot_cont_300_bf_scaffold_1152_18
unknown

Not on your lists

13669..13815
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1152_19
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13839..14324)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMQ5_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG11778.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
SCNpilot_cont_300_bf_scaffold_1152_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14529..14948)
DNA (420bp) protein (140aa)
Transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHT4_PHEZH
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1152_21
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..16335)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H2Q8_CAUCN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70486.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
Displaying 21 items

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