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SCNpilot_cont_300_bf_scaffold_1348

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1348_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..553
DNA (552bp) protein (184aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
L-aspartate oxidase (EC:1.4.3.16)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DB99EC
SCNpilot_cont_300_bf_scaffold_1348_2
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

550..966
DNA (417bp) protein (139aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000313|EMBL:AHJ62426.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AHJ62426.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUG2_GRABC
SCNpilot_cont_300_bf_scaffold_1348_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

923..1324
DNA (402bp) protein (134aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EHH03867.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EHH03867.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YK97_9RHIZ
SCNpilot_cont_300_bf_scaffold_1348_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1452..1964)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ51_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33940.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
SCNpilot_cont_300_bf_scaffold_1348_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2026..3624
DNA (1599bp) protein (533aa)
Thioredoxin reductase n=1 Tax=Caulobacter sp. AP07 RepID=J3ATL8_9CAUL
Thioredoxin reductase {ECO:0000313|EMBL:EJL37621.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP0
cyclic nucleotide-binding protein
SCNpilot_cont_300_bf_scaffold_1348_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3624..3926
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EM86_CAUCE
zinc finger UbP-type protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ83029.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
SCNpilot_cont_300_bf_scaffold_1348_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3988..4401)
DNA (414bp) protein (138aa)
cytochrome C552 n=1 Tax=Thermus igniterrae RepID=UPI000362FE0A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SCNpilot_cont_300_bf_scaffold_1348_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4585..5439)
DNA (855bp) protein (285aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ84076.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ84076.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
quinoprotein glucose dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5E81B
SCNpilot_cont_300_bf_scaffold_1348_9
unknown

Not on your lists

5456..6559
DNA (1104bp) protein (368aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1348_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6891..7913
DNA (1023bp) protein (341aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H255_CAUCN rbh
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:AAK22870.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo
SCNpilot_cont_300_bf_scaffold_1348_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7894..8508
DNA (615bp) protein (205aa)
riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Caulobacter sp. AP07 RepID=J3AUM2_9CAUL
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EJL38251.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulob
SCNpilot_cont_300_bf_scaffold_1348_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8484..9695
DNA (1212bp) protein (404aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=1 Tax=Caulobacter sp. AP07 RepID=J2QDM6_9CAUL rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobact
SCNpilot_cont_300_bf_scaffold_1348_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9692..10204
DNA (513bp) protein (171aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Caulobacter sp. AP07 RepID=J2HQW8_9CAUL
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
SCNpilot_cont_300_bf_scaffold_1348_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10204..10629
DNA (426bp) protein (142aa)
Thioredoxin n=1 Tax=Caulobacter sp. AP07 RepID=J2HQF0_9CAUL
Thioredoxin {ECO:0000313|EMBL:EJL38068.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
thioredoxin
SCNpilot_cont_300_bf_scaffold_1348_15
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10637..11695
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IYD1_9SPHN rbh
6-aminohexanoate hydrolase {ECO:0000313|EMBL:EXS70253.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
6-aminohexanoate hydrolase rbh
SCNpilot_cont_300_bf_scaffold_1348_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11692..12378)
DNA (687bp) protein (229aa)
Lipolytic protein G-D-S-L family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYS7_CAUSK
GDSL family lipase
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ABZ70408.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobact
SCNpilot_cont_300_bf_scaffold_1348_17
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12441..13121
DNA (681bp) protein (227aa)
ABC transporter ATP-binding protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GWA8_CAUCN rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAK23735.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo
SCNpilot_cont_300_bf_scaffold_1348_18
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13118..15634
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYS5_CAUSK rbh
Uncharacterized protein {ECO:0000313|EMBL:ABZ70406.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1348_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15670..16374
DNA (705bp) protein (235aa)
NIPSNAP family containing protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6470E rbh
NIPSNAP family containing protein {ECO:0000313|EMBL:EEF62303.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3
NIPSNAP family containing protein
SCNpilot_cont_300_bf_scaffold_1348_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..17075)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9D8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79398.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
SCNpilot_cont_300_bf_scaffold_1348_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17115..19178)
DNA (2064bp) protein (688aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSX3_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY30652.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1348_22
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19499..20500)
DNA (1002bp) protein (334aa)
GumN family protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWX8_CAUSK rbh
GumN family protein rbh
GumN family protein {ECO:0000313|EMBL:ABZ73186.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cau
SCNpilot_cont_300_bf_scaffold_1348_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20612..22747)
DNA (2136bp) protein (712aa)
methylmalonyl-CoA mutase n=1 Tax=Aureimonas ureilytica RepID=UPI000372CBEF
MutB protein {ECO:0000313|EMBL:GAN15538.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
methylmalonyl-CoA mutase
SCNpilot_cont_300_bf_scaffold_1348_24
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22744..24708)
DNA (1965bp) protein (655aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLA4_CAUST rbh
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADG11277.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobac
carbamoyl-phosphate synthase subunit L
SCNpilot_cont_300_bf_scaffold_1348_25
unknown

Not on your lists

comp(24778..24975)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1348_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25168..26220)
DNA (1053bp) protein (351aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
PREDICTED: mitochondrial peptide methionine sulfoxide reductase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19370 rbh
methionine sulfoxide reductase A
SCNpilot_cont_300_bf_scaffold_1348_27
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26570..27103
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DJN6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO53567.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
SCNpilot_cont_300_bf_scaffold_1348_28
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27377..28354)
DNA (978bp) protein (326aa)
NAD-dependent epimerase n=1 Tax=Rhizobium mongolense RepID=UPI0003B45C40
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KEC78813.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
nucleoside-diphosphate-sugar epimerase
SCNpilot_cont_300_bf_scaffold_1348_29
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28566..30644
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000378E68C rbh
hypothetical protein Tax=RBG_16_Planctomycetes_64_10_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1348_30
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30641..31645)
DNA (1005bp) protein (335aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase {ECO:0000313|EMBL:ACB95351.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ACB95351.1};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae;
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000377697A rbh
Displaying items 1-30 of 35 in total

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